ggKbase home page

13_1_40cm_scaffold_231_16

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: comp(20145..21212)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 367.0
  • Bit_score: 386
  • Evalue 2.90e-104
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 349.0
  • Bit_score: 503
  • Evalue 3.00e-139
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 367.0
  • Bit_score: 386
  • Evalue 8.30e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1068
TTGCCTCCGTTCACCGGCTGGTTCGACCCCGCCCCCAAGGGCGGCTACCTGCGGCTCGCGGCGCATAGCTACCTGCCTGCGAACGGCGACCTGTCCGTGCGCCTCCCCGGCTTGCGGCGGGGCGATCTGCTCACGCTCGAGGACGGGCGGGTGCTGCGCGTCAATGGCGCGCCGCCGGGCGCCGGGCTCGCTGAGCGTCCGGAGTTCGCGAAGCTCGGCGCGGTCCACCCGTCGCGGCCGCTGTTGCTCGAGACGACCAAGGCTTCGGGCCCGCGCACCGCGGAGATCCAGCGCGTGGTGGATCTGGTGTGCCCGTTCGGCTTCGGGCAGCGGGCGCTCATCGTCTCCCCGCCGAAAGCCGGAAAGACCGTGATGCTCCAGGCGGTGGCCGAAGGAGTCACCCTCAACTACCCGGAGGCGATCCTCCTCATCTTGTTGGTGGACGAGCGGCCCGAAGAGGTCAGCGAGATGATCGATTGGGGCCGCGGCGAGGTGATCGCGTCCAGCTTCGACCTGCCACACGAGCGTCACGTGGCGGTGGCCGACATGGTGTTCGAGCACGCGCGCCGCCAGGTCGAGCTCGGCAAAGACGTGGTGATCGTGCTCGACTCGCTTACCCGCCTGGCCCGCTCGCATAACACGACCGGACGATCGAGCGGCCGCACGATGTCCGGCGGCCTCGACGCCAACGCGCTAGCCAAGCCCAAGGCTCTGTTCGGCGCCGCGCGAGCGGTGCCCAACGGCGGGTCCCTCACCATCGTCGCGACCGCCCTCGTCGAGACCGAGAGCCGCATGGACGACGTGATCTTCGAGGAGTTCAAGGGAACCGGCAACGCCGAGCTGCGCCTCGCCCGCGAGCTCGCCGACCGGCGGATCTATCCGGCAGTCGACATCGCCGCGAGCGGTACGCGGCGCGAGGAGCTGCTCGCCGATCCCGCCACCGTGGAGGCGAAACAAAAACTCCGGCGGGGCCTGGTGGGGCTCCCGCCGGAGAAGGCCGTGGACGTGCTGCTGGCGCAGCTCAGGCGGACGAAGACGAACCAGGAGCTGCTGGCTCCGGCGCCGTAG
PROTEIN sequence
Length: 356
LPPFTGWFDPAPKGGYLRLAAHSYLPANGDLSVRLPGLRRGDLLTLEDGRVLRVNGAPPGAGLAERPEFAKLGAVHPSRPLLLETTKASGPRTAEIQRVVDLVCPFGFGQRALIVSPPKAGKTVMLQAVAEGVTLNYPEAILLILLVDERPEEVSEMIDWGRGEVIASSFDLPHERHVAVADMVFEHARRQVELGKDVVIVLDSLTRLARSHNTTGRSSGRTMSGGLDANALAKPKALFGAARAVPNGGSLTIVATALVETESRMDDVIFEEFKGTGNAELRLARELADRRIYPAVDIAASGTRREELLADPATVEAKQKLRRGLVGLPPEKAVDVLLAQLRRTKTNQELLAPAP*