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13_1_40cm_scaffold_89_1

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: 1..642

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 209.0
  • Bit_score: 347
  • Evalue 1.20e-92
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 212.0
  • Bit_score: 383
  • Evalue 1.60e-103
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 212.0
  • Bit_score: 348
  • Evalue 1.10e-93

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 642
TTCGACGAGGGATCGCTCGACCAGTACCTCCGCGAGATCAGCCAGTACCCGTTGATCACCCGGGAGGAGGAAGTGGCGCTCGCCCAGCGGATCAAGCAGAGCGATCCCGAGGCGCTCGACAAGCTGGTGCGCTCCAACCTGCGGTTCGTGGTGTCGGTCGCGAAGAAGTACCAGAATCAGGGCGTCTCGCTCTCCGATTTGATCAACGAGGGCAACCTCGGCTTGATCCGCGCCGCCCACAAGTTCGACGAGACGAAAGGCATCAAGTTCATCTCGTACGCGGTGTGGTGGATCCGCCAGGCGATTCTCCAGGCGCTCGCCGAGCAGTCACGCATCGTCCGCGTCCCGCTGAACCGCGCTGGCACGCTCCACCGGATCGGCAAGCGCTCGGCATCGCTGCTGCAGGAGCTGGGGCGGGAGCCGACCGTCGAGGAGATCGCCGAAGGGATGGACATCTCCGAGGAGGAGGTCGCGAAGACCCTCTCCATCTCCCAGGCGCACCTCTCGCTCGATGCGCCCCTTACGCCGGGCGAGGACAACAAGCTGCTCGACTATCTCCCCGACACCCAGAACCCCGGTCCGGACGACGAGATCTTCGAGCACGCCCTCACCGAGTCGATCTCGAGGGTCAGGAGCCGATGA
PROTEIN sequence
Length: 214
FDEGSLDQYLREISQYPLITREEEVALAQRIKQSDPEALDKLVRSNLRFVVSVAKKYQNQGVSLSDLINEGNLGLIRAAHKFDETKGIKFISYAVWWIRQAILQALAEQSRIVRVPLNRAGTLHRIGKRSASLLQELGREPTVEEIAEGMDISEEEVAKTLSISQAHLSLDAPLTPGEDNKLLDYLPDTQNPGPDDEIFEHALTESISRVRSR*