ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_40cm_scaffold_3938_11

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 8066..8752

Top 3 Functional Annotations

Value Algorithm Source
TonB domain-containing protein KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 265.0
  • Bit_score: 143
  • Evalue 1.00e-31
Putative periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 228.0
  • Bit_score: 329
  • Evalue 2.90e-87
Putative periplasmic protein TonB id=4018762 bin=GWA2_Elusimicrobia_69_24 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 248.0
  • Bit_score: 73
  • Evalue 3.50e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 687
GTGAGGCGCGGGCCGCGCGTGCCGACCAACGTCGGACTCGGCCTGGCGGGCACGGCCGCGGTCCACGGCGCGGCGGTGTTCTTGCTGCTGGCGTCGGCGGGCGGCGCTCGGAGGGTGCCGCCCACGTACCGGGTCCGGCTCATCGCGGCCCCGGAGGCAGGTCAGGAGCAGCGCAAGGCGCCCGAGGCGGTCCAGCGCGAGGCGGAGCAGCAGGCGCCGCCGGCGCCGTCGCGCAGGCCGCCGCCGCGCAGCACCGTGTCCCAGGCGGCGCCGCCCCCGGTGTCCGACACGCGCCAGCGGGAGGCCGCGCCGCGGACGACGCCCAAGGCGCAGCCCTTGCCCGGCGAGAAGCCGTCCACCGGCAGTGACGTCGCGACGGTCAGCACGGAAGGGATCGAGTTCCCCTTCCCCGAGTATCTGCAGAACATCGTCTCGCAGATCCTCCGGCGCTGGCAGCGGCCGCTGCAGAGCACCCCTCTCGAGGCGGAGGTCTCCTTCTTCGTGCATCGGGACGGATCGGTGACCGACCTGCAGTTCATCAGGCGCTCCGGCAACTTCGCCTTCGATCTCGAGGCTCAGGGCGCCGTCGAGGAGGCCGGGCGGTTCAAGGCGTTCGGCGCGCTGCCGGACGGCTGGCCGGCGGACGTGCTGTTCGTGCGATTTTATTTCTCGGGAAGGCGTCAGTGA
PROTEIN sequence
Length: 229
VRRGPRVPTNVGLGLAGTAAVHGAAVFLLLASAGGARRVPPTYRVRLIAAPEAGQEQRKAPEAVQREAEQQAPPAPSRRPPPRSTVSQAAPPPVSDTRQREAAPRTTPKAQPLPGEKPSTGSDVATVSTEGIEFPFPEYLQNIVSQILRRWQRPLQSTPLEAEVSFFVHRDGSVTDLQFIRRSGNFAFDLEAQGAVEEAGRFKAFGALPDGWPADVLFVRFYFSGRRQ*