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13_1_40cm_scaffold_3974_16

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: comp(15920..16474)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 184.0
  • Bit_score: 274
  • Evalue 1.10e-70
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 184.0
  • Bit_score: 348
  • Evalue 6.40e-93
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 184.0
  • Bit_score: 296
  • Evalue 5.80e-78

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 555
GTGGTGCAGCGCCACCTCGGAGGCGACCCGCAGGCGTTCGGCACCCTGGTCGACCGCTACCAGACGCGCCTGCTCAACTTCGTCAACCGCACGATCGGGGACCGGGAGCGGGCCGAGGACCTGGTGCAGGAAGTGTTCATCCGGGTGTTCCGGCACCTGCACCGGTTCGACCAGACCAAGAAATTCTCGACGTGGATTTACACGATCGCGTCGAACCTGGCCAAGAACGAGCTGCGCAACCGCAGCCGCAACCCGCTGGTGCTGTTCCAGACGATCAAGAAGAACTGGGAGGCCGACCACCGGCCGTTGCAGTTCGAGGACACGACCGCGCGGCCCGACGATCTCTACCGCAAGCGGTTCCTGAAGGACGCGGTGGATCAGTGCGTGTGCCAGCTGCCCCAACATCACCGGGTGGTGTTCGTGTTGCGCGAGCTCGAGGGCAAGAGTTATCAGGAGATCGCCGAGATCACCGCCTGCAACCTCGGCACCGTGAAGAGCCGGCTCAACCGGGCCCGGAACAGCTTCGCTCAGCTGATCGCGCCGCTGCTGAAGTAG
PROTEIN sequence
Length: 185
VVQRHLGGDPQAFGTLVDRYQTRLLNFVNRTIGDRERAEDLVQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKNWEADHRPLQFEDTTARPDDLYRKRFLKDAVDQCVCQLPQHHRVVFVLRELEGKSYQEIAEITACNLGTVKSRLNRARNSFAQLIAPLLK*