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13_1_40cm_scaffold_7280_1

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 1..552

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 183.0
  • Bit_score: 284
  • Evalue 6.20e-74
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 183.0
  • Bit_score: 328
  • Evalue 6.80e-87
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 183.0
  • Bit_score: 289
  • Evalue 7.10e-76

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 552
CGGCTGCGGATCTCCAAGACGTACCAGGACATTGCGCGCGACAAGAAGCAGTACCAGGGAGAGAACAAGGAGTTCATCAACCAGCGCCTCAACAGCGCCCACTGGATGATCCAGGCGATCGAGCAGCGGCGCCAGACCATGCTCAAGGTGATGAACTTCATCGTGGACCGGCAGCGCGAGTTCTTCGAGAAGGGCGTCGAGTTCCTGAGGCCGCTCACCCTGCGGGAGGTGGCCGAGGTGATCGGGATGCACGAAAGCACAGTGAGCCGCGTGACCAACGAGAAGTACGTCCAGACTCCGCGCGGGCTGCTGCCGCTCAAGTTCTTCTTCTCGAGCGGCCTCTCGACGACCACGGGAGAGGACGCCAGCGCGCGGAGCATCAAGGCGCAGATCGAGAAGATGGTGACCGAGGAAGACCAGAGGAATCCGCTGACCGATCAGCAGATCGTGGAGTTGTTCGCCCGGCGCGGCGTCAAGATCGCCCGCCGCACGGTGGCGAAGTACCGCGACCAGCTGGGCGTGCTGCCGGCCCGCATGCGCAAGCGGCTATGA
PROTEIN sequence
Length: 184
RLRISKTYQDIARDKKQYQGENKEFINQRLNSAHWMIQAIEQRRQTMLKVMNFIVDRQREFFEKGVEFLRPLTLREVAEVIGMHESTVSRVTNEKYVQTPRGLLPLKFFFSSGLSTTTGEDASARSIKAQIEKMVTEEDQRNPLTDQQIVELFARRGVKIARRTVAKYRDQLGVLPARMRKRL*