ggKbase home page

13_1_40cm_scaffold_740_8

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 5384..5932

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 185.0
  • Bit_score: 138
  • Evalue 5.50e-30
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 176.0
  • Bit_score: 143
  • Evalue 4.10e-31
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 178.0
  • Bit_score: 141
  • Evalue 3.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 549
GTGCAGGCGCCTGAAGAACCGCCGGACGCCACCGTCGTCGCGCGCGTGCTGAGCGGCGACGCAGAGGCGTTCGGGATCCTCATCCGCCGCTACGAGCCCGCGCTGCATCGCTTCGCCACGCGGATGCTCGGGAGCGCCGACGCCGCCGCCGACGCGGTGGCCGAAGGCTTGGTGCGAGCGTACCGGCACCTGCGGAGTTGCCGGGAGCCCGCCCGGTTTCGGACGTGGGTGTATCGCATCGTGGCGAACCGGTGCAAGAGCCATCTGGCCCGGCGACCGTCGAGCGACCTGTCCCTCGACGACCTGCCGCCGCTGCCCGATCCCGCGGACAACGCGACGGCGCTGGAGCGGGCCGAGCAGCTGATGCTGGTGACGCGAGCGCTGGGGGGGCTCTCCGCGGAGAAGCGAGAGGCGTTCGTGTTGAAGCACGTCGAGGGTCTGAGTTATGAGGAGATGGCCGCCGTCACCGGCGCTCGGATCCCGACGTTGAAGATGCGCGTCCACCGCGCGCGCGAAGCGCTGCTGGACACGCTGAAGGAGTACCAATGA
PROTEIN sequence
Length: 183
VQAPEEPPDATVVARVLSGDAEAFGILIRRYEPALHRFATRMLGSADAAADAVAEGLVRAYRHLRSCREPARFRTWVYRIVANRCKSHLARRPSSDLSLDDLPPLPDPADNATALERAEQLMLVTRALGGLSAEKREAFVLKHVEGLSYEEMAAVTGARIPTLKMRVHRAREALLDTLKEYQ*