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13_1_20cm_full_scaffold_140285_2

Organism: 13_1_20CM_Gemmatimonadetes_69_60_partial

partial RP 18 / 55 BSCG 18 / 51 ASCG 2 / 38
Location: 849..1364

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 184.0
  • Bit_score: 189
  • Evalue 2.50e-45
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 173.0
  • Bit_score: 243
  • Evalue 1.60e-61
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 176.0
  • Bit_score: 190
  • Evalue 5.50e-46

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAAGACCGGCCTGCACCAGCACATCGGGCTGCGCCAGGACCTGCGCATCAATCCTCGCCTGTACCAGGCGATGGATCTGCTGTACATGCCGCTCTTGGACCTGCAGCAACACTTGAAGCAGGAGCTGCTCGGCAACCCGTTCCTCGAGCTGATCGAGCCGGAAGACGAGACCGAGCTGCCCCTCACCCAGGACGGCGTCGAGGAGAAGAAAGAGACCGAAAACAACGACGAGCCCAACTGGGAGGACATCCTGCTGGACGACGGCTCCGATCAGGGCACGCCGCCGCGCGATATGAGCGAGGCCCGGGAGTACGTCGAGCCGGTGCCGGTCGAGGGCAAGGATCTGTCGCACCACCTGCGCGACCAAATGCGGCTGCTCGAGCTGACCCCGCGCCAGCAGCTGCTCGCCGAAGAGTTCATCGGCAACATCGCCGAGGACGGCTATCTCGGCGCCTCGCCCGAGGAGATCGTGCGCGGCGCCAACCAGCTGCTCGAGGAGCACGCGGTCGAAGCC
PROTEIN sequence
Length: 172
MKTGLHQHIGLRQDLRINPRLYQAMDLLYMPLLDLQQHLKQELLGNPFLELIEPEDETELPLTQDGVEEKKETENNDEPNWEDILLDDGSDQGTPPRDMSEAREYVEPVPVEGKDLSHHLRDQMRLLELTPRQQLLAEEFIGNIAEDGYLGASPEEIVRGANQLLEEHAVEA