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13_1_20cm_full_scaffold_51842_3

Organism: 13_1_20CM_Gemmatimonadetes_69_60_partial

partial RP 18 / 55 BSCG 18 / 51 ASCG 2 / 38
Location: comp(1541..2107)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 313
  • Evalue 1.60e-82
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 188.0
  • Bit_score: 328
  • Evalue 7.00e-87
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 188.0
  • Bit_score: 314
  • Evalue 2.10e-83

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 567
GTGAAGTTCATCTCCTACGCCGTGTGGTGGATCCGGCAGGCGATTCTCGCCGCGCTGGCGCGCCAGGGGCGCACCGTACGCGTGCCGCTCAATCGCACGGCGGACCTGTCACGCATCGTCCGCACTGCGGAATACCTGCGGCAGACGTTGCGGCGCGAGCCCACGCCGGAAGAGATCGCGGACGCGACCAAGCTGTCGCTCGAGGTGGTGCAGTCGCTCGCCGCCTTGAACACCGGCGACGTGCGGCTCGACGCGCCGCTCGATCCCGACGGCGATCGGTCGCTGATCGAGCGCTTCATCGCCGAAGATCTCCCCGACACGGAAGACCAGGCGATGGACCGCTTCCTGTCGGACGAGATCGAGTCGGCGCTCAACACGCTGCAGCGGCGCGACGCGAAGGTGCTGCGCCTGTACTTCGGGCTGGACGGCGGTCGCGAGCACACGCTCGAGGAGATCGGCGGGATGCTCGGCGTCACCCGCGAGCGCGTGCGGCAGCTGCGGGATCGCGCGCTCAAGCGGCTGCGGGATGGGGACGTGGGGAAGGCCTTAGCCAGCTTCGCCGCGTAA
PROTEIN sequence
Length: 189
VKFISYAVWWIRQAILAALARQGRTVRVPLNRTADLSRIVRTAEYLRQTLRREPTPEEIADATKLSLEVVQSLAALNTGDVRLDAPLDPDGDRSLIERFIAEDLPDTEDQAMDRFLSDEIESALNTLQRRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLRDGDVGKALASFAA*