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13_1_20cm_full_scaffold_122240_1

Organism: 13_1_20CM_Gemmatimonadetes_69_52_partial

partial RP 18 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 1 / 38 MC: 1
Location: comp(3..644)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 212.0
  • Bit_score: 360
  • Evalue 1.50e-96
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 214.0
  • Bit_score: 306
  • Evalue 1.70e-80
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 213.0
  • Bit_score: 317
  • Evalue 3.70e-84

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGACGACTCTTGATTTGAGCGGGCTGGTCCGCCCCCACCTGGTCGAGATGACCAAGCGGGAAGACAACCCGAATGCCGCCGAGTTCCGCCTCCAGCCGCTCGAGCGGGGCTACGGCTACACCCTCGGCAACTCGTTGCGTCGGATGCTGCTCTCCTCCCTGCGGGGCGCGGCCGTTTGGGCGTTCCGCCTGGACGGCGTCGTGCACGAGCACCAGACCATCCCCGGGGTGGTCGAGGACGTGCACCAGATCATTCAGCGGCTGAAGCAGCTGACGCTGGTGCTGGCGCCGGACGTGGACGAGGCGGTCCTGCACATCAAGCACGACAAGGCCGGTCCCGTGTACGCGCGCGACATCGAGGCGCACAGCGCGGTGAGCATCGTGAATCCCGACCAGCTGCTGTTCACGGTCCAGGACGACCGCGACATCGGGGGCGAGCTGTACGTGAACAAGGGCCGCGGCTACGTCGAGGCCGAGCAGCACCCCATCGATCGCACCATGCCGGTGGACGTCGTGCGGGTGGATTCGATCTACAATCCCGTGCGGCGCGCCAACTTCACCGTCGCGGAGACGCGCGTGGGGCAGCGCACCGACTACGACCGGCTCACGCTCACGGTCGAGACCAACGGGACCATTTCTCCC
PROTEIN sequence
Length: 214
MTTLDLSGLVRPHLVEMTKREDNPNAAEFRLQPLERGYGYTLGNSLRRMLLSSLRGAAVWAFRLDGVVHEHQTIPGVVEDVHQIIQRLKQLTLVLAPDVDEAVLHIKHDKAGPVYARDIEAHSAVSIVNPDQLLFTVQDDRDIGGELYVNKGRGYVEAEQHPIDRTMPVDVVRVDSIYNPVRRANFTVAETRVGQRTDYDRLTLTVETNGTISP