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scnpilot_cont_500_p_scaffold_240

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_240_31
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28793..29584
DNA (792bp) protein (264aa)
Citrate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV75_PSEUX rbh
citrate synthase
Citrate synthase {ECO:0000313|EMBL:AEA28621.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
scnpilot_cont_500_p_scaffold_240_32
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29586..30446
DNA (861bp) protein (287aa)
Catechol 1,2-dioxygenase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1ID41_9PSEU rbh
Catechol 1,2-dioxygenase {ECO:0000313|EMBL:KDN18784.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
catechol 1,2-dioxygenase
scnpilot_cont_500_p_scaffold_240_33
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30448..31479
DNA (1032bp) protein (344aa)
Methionine synthase vitamin-B12 independent n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMV4_PSEUX rbh
vitamin-B12 independent methionine synthase
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:AEA25053.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_240_34
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31476..32768
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI000383018B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP52190.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 549
scnpilot_cont_500_p_scaffold_240_35
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32752..33948)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00035D5CC5 rbh
Oxidoreductase {ECO:0000313|EMBL:EXU68080.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
oxidoreductase
scnpilot_cont_500_p_scaffold_240_36
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34118..35782
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029ABE7A rbh
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
putative hydrolase
scnpilot_cont_500_p_scaffold_240_37
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35757..36908)
DNA (1152bp) protein (384aa)
long-chain-acyl-CoA dehydrogenase (EC:1.3.99.13)
Long-chain-acyl-CoA dehydrogenase {ECO:0000313|EMBL:AEA26164.1}; EC=1.3.99.13 {ECO:0000313|EMBL:AEA26164.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
acyl-CoA dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEA2F rbh
scnpilot_cont_500_p_scaffold_240_38
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37003..38841
DNA (1839bp) protein (613aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ15_PSEUX rbh
Fis family transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:AEA24306.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P
scnpilot_cont_500_p_scaffold_240_39
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38981..40030
DNA (1050bp) protein (350aa)
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
S-(Hydroxymethyl)glutathione dehydrogenase {ECO:0000313|EMBL:AEA22562.1}; EC=1.1.1.284 {ECO:0000313|EMBL:AEA22562.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNV0_PSEUX rbh
scnpilot_cont_500_p_scaffold_240_40
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40044..40901
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000360F94A rbh
Uncharacterized protein {ECO:0000313|EMBL:EWM18891.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_240_41
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40931..41266
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI0003496373
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABS01827.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC
scnpilot_cont_500_p_scaffold_240_42
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41269..41667)
DNA (399bp) protein (133aa)
Glyoxalase family protein n=4 Tax=Mycobacterium avium complex (MAC) RepID=H8IVI6_MYCIA
Glyoxalase {ECO:0000313|EMBL:CQD19758.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
glyoxalase family protein
scnpilot_cont_500_p_scaffold_240_43
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41731..42696
DNA (966bp) protein (322aa)
Helix-turn-helix type 11 domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR46_PSEUX rbh
helix-turn-helix type 11 domain-containing protein rbh
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:AEA24483.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard
scnpilot_cont_500_p_scaffold_240_44
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42689..44140
DNA (1452bp) protein (484aa)
Putative integral membrane transport protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHZ2_CLAMS
transport protein
Putative integral membrane transport protein {ECO:0000313|EMBL:CAQ01418.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michigan
scnpilot_cont_500_p_scaffold_240_45
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44166..44831
DNA (666bp) protein (222aa)
putative methyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEEBB
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EXG82289.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cr
methyltransferase
scnpilot_cont_500_p_scaffold_240_46
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44979..45467
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037EE5D5
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:AIJ22818.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" sourc
scnpilot_cont_500_p_scaffold_240_47
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45533..45886)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QGS4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN76337.1}; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;
hypothetical protein
scnpilot_cont_500_p_scaffold_240_48
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45883..46611)
DNA (729bp) protein (243aa)
respiratory nitrate reductase subunit gamma (EC:1.7.99.4) rbh
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:AEA26465.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26465.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardi
Respiratory nitrate reductase, gamma subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW51_PSEUX rbh
scnpilot_cont_500_p_scaffold_240_49
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46608..47252)
DNA (645bp) protein (215aa)
Nitrate reductase molybdenum cofactor assembly chaperone n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW50_PSEUX
nitrate reductase molybdenum cofactor assembly chaperone
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:AEA26464.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
scnpilot_cont_500_p_scaffold_240_50
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47249..48910)
DNA (1662bp) protein (554aa)
nitrate reductase subunit beta (EC:1.7.99.4)
Nitrate reductase, beta subunit {ECO:0000313|EMBL:AEA26463.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26463.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
Nitrate reductase, beta subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW49_PSEUX rbh
scnpilot_cont_500_p_scaffold_240_51
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48910..52617)
DNA (3708bp) protein (1236aa)
Nitrate reductase, alpha subunit {ECO:0000313|EMBL:AEA26462.1}; EC=1.7.99.4 {ECO:0000313|EMBL:AEA26462.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
nitrate reductase subunit alpha (EC:1.7.99.4)
Nitrate reductase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW48_PSEUX rbh
scnpilot_cont_500_p_scaffold_240_52
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52887..54065
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW47_PSEUX rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26461.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_240_53
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54062..54475
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JJ09_STREN
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCB72055.1}; Uncharacterized protein {ECO:0000313|EMBL:AEW98898.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; St
scnpilot_cont_500_p_scaffold_240_54
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54515..54907
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00036019BF
Uncharacterized protein {ECO:0000313|EMBL:EMF20451.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;
hypothetical protein
scnpilot_cont_500_p_scaffold_240_55
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55477..56292)
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UVP7_9ACTO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFL08367.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
surface antigen protein
scnpilot_cont_500_p_scaffold_240_56
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56412..56759
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KST2_STRRC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EST35088.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
scnpilot_cont_500_p_scaffold_240_57
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56800..57141)
DNA (342bp) protein (114aa)
Chromate resistance protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KSH8_STRRC
Chromate resistance protein {ECO:0000313|EMBL:EST35087.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus s
chromate resistance protein
scnpilot_cont_500_p_scaffold_240_58
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57227..57727)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KUI5_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST35086.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
Protein chrB
scnpilot_cont_500_p_scaffold_240_59
unknown

Not on your lists

comp(57727..58050)
DNA (324bp) protein (108aa)

This feature has no annotations

Displaying items 31-59 of 59 in total

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