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scnpilot_cont_500_p_scaffold_316_24

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 21849..22547

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE243 similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 220.0
  • Bit_score: 312
  • Evalue 4.60e-82
  • rbh
RNA polymerase sigma-W factor {ECO:0000313|EMBL:EFL04544.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 217.0
  • Bit_score: 275
  • Evalue 8.70e-71
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 190.0
  • Bit_score: 274
  • Evalue 2.30e-71

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Taxonomy

Streptomyces sp. AA4 → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTCCCCGACGACCGCTCCCCCGGTCGGGGCGCCCCCGGGTCCCACCCGGAACGCCCCGGTGACGGGCCCGCCGCTCCCCCGGCAGCGACCGCACGGCGCCGACGAGGCCGCCCCGGACCCGGACGCCGCCCCGCCCGCCGAGCCCGAGGACGCCAACGGCGCCTGGGCGCTCGTCAAGGCCGCACAGGCCGGCGACATGGCCGCCTTCGGCGAGCTGTTCGACCGCTACTACGACGTCGTGTTCCGGTTCGTGCTGTTCCGGATGGGTGACCGCACCCTCGCCGAGGACATCACCCAGGAGACGTTCGTCCGCGCGCTGCGCCGCATCACCTCGGTGAGCTACCAGGGCCGTGACATCGGTGCGTGGTTCGTCACCATCGCGCGCAACCTGATCTTCGACCACGTGAAGTCGAGCCGCTACCGGCTCGAGCAGACCACTGCCGAGATCGTCGAACTCTCACCGAGCACCAGCGGCCCGGAGCAGCAGGTGCTCGACGGGGCCACCAACAACGAGCTCCTCAAGTGCATCGGCAAACTGAACCCCGACCAGCAGGAATGCATCAAGCTGCGGTTCCTGCAGGGGCTGTCGGTGGCCGAAACGGCGGTCATCATGGATCGCAACGAGGGGGCCGTCAAGGCCCTGCAGCACCGTGCGGTCCGTCGGCTCGCCCAGCTGTTACCGGAGGGGCTGCGATGA
PROTEIN sequence
Length: 233
MSPTTAPPVGAPPGPTRNAPVTGPPLPRQRPHGADEAAPDPDAAPPAEPEDANGAWALVKAAQAGDMAAFGELFDRYYDVVFRFVLFRMGDRTLAEDITQETFVRALRRITSVSYQGRDIGAWFVTIARNLIFDHVKSSRYRLEQTTAEIVELSPSTSGPEQQVLDGATNNELLKCIGKLNPDQQECIKLRFLQGLSVAETAVIMDRNEGAVKALQHRAVRRLAQLLPEGLR*