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scnpilot_cont_500_p_scaffold_558_16

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(13387..15114)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037E734D similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 576.0
  • Bit_score: 790
  • Evalue 1.40e-225
  • rbh
Fis family sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 585.0
  • Bit_score: 790
  • Evalue 4.00e-226
Fis family sigma-54 specific transcriptional regulator {ECO:0000313|EMBL:AIJ24675.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="A similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 585.0
  • Bit_score: 790
  • Evalue 2.00e-225

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
ATGCGGCGAGACCCGACCCTGTCGCCGGTGCAGCGGGAACGCACCCGCCGCAGCCGGGAGGCGCTCGTCGGGGGTGGGCTGCTGGCGCTCCCGCCCGGCCGCAGTGGCGTTCCGCAGCACATCGAGAAGAGCTGGCGCCGGTGCGTGGGCGAGCAGGTACCCGTCGCGCCCGACCACATCGGCTACCGCGATCCGGGCGACGACCAGTCGGTGCTGCGCCGGGCCGCGATGCCGGTGCTGGAGCGGCTCAAGGACAGCTTCGCCGACGTGCCCGTGGCCATGGTGCTGTCGGACGCCACCGGGCTGATCATCGCGCGGCACACCGACGTCCGGCGCCAGCGCGTCGTCATGGACCGGGCCAACGCGGCCGAGGGTTTCGACTTCTCCGAGCTCTCGATCGGCACCAACGGCATCGGCACCGTGCTCGTCGAACGCCACCCCGTGCTCGTCCGCGGTCCGGAGCACTACAACGCCCTGCTGGAGAACCTCACCTGCGCCGGCACCCCGATCATCGAGCCCTACACCGGACGGATGGTCGGCTCGTTCTCGCTGGCCTGTGCCATGCGCGACGTCCACGCGCTGATGGCGGTGATGGCCGGCGACATCGGGCGCCAGATCGAGTCCCGCATCCTGGAGGAGGCGGGTGACCGGCACCGGCGGCTCGCGGCGGCCTACCTGGCCGTCGACCGGTCCGGCGTCGGCGCGCTCGTCGTCGACGAGGAGACGGTGCTCGCCAACCGGCTCGGGCTCGCCCACACCGGGCCGGAGCTGCATCCGCTGCTGTGGCGGTTCCTCGTCGAGCACGGGCCGTCCGGGCCGGCGCGCATGCAGGTCCCGCTGTCGGACGGCCTGCACGACGCCGTCGTCGAGCCGGTCGACGACGGCGGCCCGGCGGCCTACAGCGTCCGGCTGCTGCCGCGGCGCCCGCCGGAACCGTCGACCCCGCGCGCCGCGGTGCGTCGCGACCGCTTCCACGTCGACGACGGCGTCGACCGCCAAGTGGCCACGGCGGTGCGGCACGGGGAGGTGGTCGCCGTCGTCGGCGCGGGTGGGACGGGCAAGCTGCGGACCGCCGTGCGCACCGTGGCGCACCAGGGCGCCGGGGACCCGCTGGTGGTCGAACCGCACCGGGATCCCGACTGGTTCGCCACGGCGAAGGCCGCGGCCGTGGACGGCCGTGGCGTGGTGCTGCGCCGGGTGCACGAGTCGCCCTCGCCGTCCGTGGCGCAGGTGCAGGCGCTGGTCGGGACGGGGGCGCCGATCGCGCTCACCGCCGACCTCGACGCCGCCGGTGACGACGTGGTCGCGATGGTGCGCCGCGTCGCCACCACCGTCCGGCTGCCGGGTCTCGCCCAGACCGTCGAGCACCTGCCGTCGCTCGTGCAGGAGATGCTGGCGCAGCGGCCCGTGCCGGAGTCCGCGACGCGGTTCTCCCCGGCGGTGTGGGACCGGCTGATGGCCTGGCACTGGCCGGGCAACCTCGCGGAGCTGCACCACACGGTGGCGCTGCTGGCCCGCCGGGCCGAGGGCGGCACCGTCGGGATCGACGACCTGCCCGACGAGCTCCGCGCGCACCGCCGCACGCTGGGGAAGCTGGAGTCCGCCGAGCGGGAGGCGGTGGCCGAGGCCCTGCGGGCGGCGGGCGGCAACCGCAGCCGGGCCGCTGCGGCCCTGGGGATCGGGCGCAACACCCTCTACCGCAAGATGCGAGAGTTCGGGATCAGCTGA
PROTEIN sequence
Length: 576
MRRDPTLSPVQRERTRRSREALVGGGLLALPPGRSGVPQHIEKSWRRCVGEQVPVAPDHIGYRDPGDDQSVLRRAAMPVLERLKDSFADVPVAMVLSDATGLIIARHTDVRRQRVVMDRANAAEGFDFSELSIGTNGIGTVLVERHPVLVRGPEHYNALLENLTCAGTPIIEPYTGRMVGSFSLACAMRDVHALMAVMAGDIGRQIESRILEEAGDRHRRLAAAYLAVDRSGVGALVVDEETVLANRLGLAHTGPELHPLLWRFLVEHGPSGPARMQVPLSDGLHDAVVEPVDDGGPAAYSVRLLPRRPPEPSTPRAAVRRDRFHVDDGVDRQVATAVRHGEVVAVVGAGGTGKLRTAVRTVAHQGAGDPLVVEPHRDPDWFATAKAAAVDGRGVVLRRVHESPSPSVAQVQALVGTGAPIALTADLDAAGDDVVAMVRRVATTVRLPGLAQTVEHLPSLVQEMLAQRPVPESATRFSPAVWDRLMAWHWPGNLAELHHTVALLARRAEGGTVGIDDLPDELRAHRRTLGKLESAEREAVAEALRAAGGNRSRAAAALGIGRNTLYRKMREFGIS*