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scnpilot_cont_500_p_scaffold_950_28

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(23986..24330)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUU1_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 114.0
  • Bit_score: 189
  • Evalue 2.20e-45
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolysp similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 112.0
  • Bit_score: 191
  • Evalue 6.20e-46
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 114.0
  • Bit_score: 189
  • Evalue 6.20e-46

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Taxonomy

Saccharopolyspora rectivirgula → Saccharopolyspora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGGCCGACCGCGTGCTCCGTGGCAGCCGGCTCGGGGCTGTCAGCTACGAGACCGATCGCAACCACGACCTCGCGCCGCGGCAGTCGATGCGCTACGCGTGCCCGCGCGGGCACGACTTCGAGGTGCCCTTCGCGAACGACGCCGAGGCTCCGGCCACCTGGGAGTGTCGCCTCCACGGCAGCATCTCCAAGCTGGTCGACGGCGTCGAGCCGGAGACGAAGAAGGTCAAGCCCCCGCGCACGCACTGGGACATGCTGCTCGAGCGCCGCTCGGTGGCCGATCTCGAGGTGCTGCTCGCGGAGCGTCTGGAACTGCTCGCCGAGCGCCGGCGCGAGATCGCCTGA
PROTEIN sequence
Length: 115
MADRVLRGSRLGAVSYETDRNHDLAPRQSMRYACPRGHDFEVPFANDAEAPATWECRLHGSISKLVDGVEPETKKVKPPRTHWDMLLERRSVADLEVLLAERLELLAERRREIA*