ggKbase home page

scnpilot_cont_500_p_scaffold_874_35

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 25100..25651

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Streptomyces auratus AGR0001 RepID=J1RHB0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 182.0
  • Bit_score: 259
  • Evalue 3.60e-66
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EJJ03729.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 182.0
  • Bit_score: 259
  • Evalue 5.10e-66
sig16; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 183.0
  • Bit_score: 258
  • Evalue 1.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces auratus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCCGACGAGCCCGAGGTCCTCGGCCTGCTGGCGCTGATGCTGCTGATCGAGTCGCGTCGCCCCGCCCGCACCACTCCCGAGGGCGCGCTCGTGCTGCTCGCCGACCAGGACCGGTCCCGCTGGGACGCCCGGCTCGTCGCGGCGGGGCAGGCGCTGGTGCGGGAGTGCGTGCGGCGCAACCGGCCCGGGCCCTACCAGATCCAGGCCGCGATCAACGCCGTCCACAGCGACGGGCCCGGTGCGGCGGCCACGGACTGGCGCCAGATCCTCGCCCTCTACGACCAGCTCCTCGCAGTGGCCCCGAGCCCGGTGGTGGCGCTGCACCGGGCCGTCGCGGTGGCCGAGGTCGACGGACCGCAGGTGGCGCTCGCCGTGGTCGACGCGCTGCCCCCGGTGGCCGGCCACCTCCGGCACGCCGTGCGCGCGGACCTGCTGCGGCGGCTCGACCGGGCCGCCGAGGCCGTCGCCGCCTACGACGCCGCCATCGAGCTCACCGGCAACGAGGTGGAGCGGGCGTTCCTCCGGGCCCGGCGTTCCCCGTTGGTGTGA
PROTEIN sequence
Length: 184
MPDEPEVLGLLALMLLIESRRPARTTPEGALVLLADQDRSRWDARLVAAGQALVRECVRRNRPGPYQIQAAINAVHSDGPGAAATDWRQILALYDQLLAVAPSPVVALHRAVAVAEVDGPQVALAVVDALPPVAGHLRHAVRADLLRRLDRAAEAVAAYDAAIELTGNEVERAFLRARRSPLV*