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scnpilot_cont_500_p_scaffold_1092_54

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 44797..45450

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0D2_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 217.0
  • Bit_score: 295
  • Evalue 5.40e-77
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 217.0
  • Bit_score: 295
  • Evalue 1.50e-77
Regulatory protein TetR {ECO:0000313|EMBL:AEA26728.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 217.0
  • Bit_score: 295
  • Evalue 7.60e-77

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGACGAGTCCGCTCACCCGGGAGCAGGTGTTCGCCACCGCGCTGCGGCTCGTCGACACCGACGGTGTGGAGGCGCTGTCGATGCGCCGGCTCGGCAAGGCGCTCGACCGCGACCCGATGCGGCTCTACCGGCACGCCGAGAGCAAGGAGGCATTGCTCGACGGGGTGGTGGAGCTGGTGATGTCGGAGCTGCAGGTGCCGGTGGCCGACGACGACTGGGAGCAGGCGCTGCGCCGCACCGCCCACGCCTACCGCGACCTCGCGCTCGCCCACCCACACGTCGTCCCGCTGCTGGTGACCCGTCCGCTGGCCACGCCGCTGGCCCGCCGGCCGCTGGGCACGCTGCGTCCGCTGGAACAGCTGCTCGGGCTGCTGGTCAGGGCCGGTTTCGACGAGCGCGGCGCGCTCTACGCCTACCGCCTCTACATGGGTTTCCTGAACGGTCATCTGCTCAACGAGCTGCAGGAGCGTGTCGTGGCGCCCGACGAGACCGACGACGTGCTGCGGCTGGGCCTGCACCGGCTGCCGATCGCGGACTTCCCCCGCCTGCGTTCCCTGGCCGGCGCCCTCGCCGCCTACGACGGGGGACGCGAGCTCGACGAGGGCCTCGACATCGTGCTCGCGGGGTTGCGGGCGCGTACCGCGGTGGGGTGA
PROTEIN sequence
Length: 218
VTSPLTREQVFATALRLVDTDGVEALSMRRLGKALDRDPMRLYRHAESKEALLDGVVELVMSELQVPVADDDWEQALRRTAHAYRDLALAHPHVVPLLVTRPLATPLARRPLGTLRPLEQLLGLLVRAGFDERGALYAYRLYMGFLNGHLLNELQERVVAPDETDDVLRLGLHRLPIADFPRLRSLAGALAAYDGGRELDEGLDIVLAGLRARTAVG*