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scnpilot_cont_500_p_scaffold_1092_73

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 64202..64813

Top 3 Functional Annotations

Value Algorithm Source
sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDF89 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 218.0
  • Bit_score: 261
  • Evalue 8.10e-67
Ribosomal subunit interface protein {ECO:0000313|EMBL:EID55273.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 227.0
  • Bit_score: 258
  • Evalue 9.60e-66
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 232.0
  • Bit_score: 246
  • Evalue 7.60e-63

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Taxonomy

Saccharomonospora xinjiangensis → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 612
GTGGAGATCGTTGTCACCGGCCGTAACGTCGAGGTTCCGGAGCATTTCCGGGAACACATCGCCGACAAGGTCGCCCGTCTGGAACGCTACGACCACAAGATCGTCGGTATGGAGGTGGAGCTCTTCCACGAGCCCAACCGGCGCCAGAGCAAGAGCTGTCAGCGGGTGGAGATCACCGGCCGCGGCTGTCAGGGAGTGGCCCGGGCCGAGGCCTGCGCCCAGGACTTCTACGCGGCGCTCGACTGCGCCGTGGCCAAGCTCGAGTCCCGCCTGCGACGCTCGCACGACCGTCGGCGGATCACCGGCAGGCGCACCCGCGTCACGGTCGGACGGGGCGGCGGCACCGCGGTGCTCGAGGACCTGGAGACGCTCGTCGACATCCCCGGCCCCCGGGTGCACGACGAGAACATCCCACCTGGCGACCAGATCCCGGGCAAGATCGTCCGGCACAAGACCCATACGGCCGACCCGATGAGCGTGGACGACGCCCTGTCGCGCATGGAGCTCGTCGGCCACGACTTCTACCTCTTCTCCGACGCCGACACCGGAGAACCCAGCGTCGTCTACCGGCGCAAGGGCTACGACTACGGCGTGATCCAGCTCGTGCGCTAG
PROTEIN sequence
Length: 204
VEIVVTGRNVEVPEHFREHIADKVARLERYDHKIVGMEVELFHEPNRRQSKSCQRVEITGRGCQGVARAEACAQDFYAALDCAVAKLESRLRRSHDRRRITGRRTRVTVGRGGGTAVLEDLETLVDIPGPRVHDENIPPGDQIPGKIVRHKTHTADPMSVDDALSRMELVGHDFYLFSDADTGEPSVVYRRKGYDYGVIQLVR*