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scnpilot_cont_500_p_scaffold_2524_13

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 11307..11858

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003806125 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 183.0
  • Bit_score: 143
  • Evalue 2.20e-31
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KJK51109.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieri similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 170.0
  • Bit_score: 146
  • Evalue 3.70e-32
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 169.0
  • Bit_score: 141
  • Evalue 3.10e-31

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACGGACACCGGCATCGACGTGCTGCTGCACAACGCGGCCCGGGGCGACCAGCGCGCCTGGGAGGAGATCGTCGGGCGCTACCGCGGGCTCGTCGGCGCCGTCGTCCGGTCGTTCCGTCTGCAGGAGGCCGACGCCCGCGACGCCGAGCAGCGCACGTGGCTGCGGCTGGTCGAGAACCGGGCCCGCATCCGCGACCCGGAGCGCCTCGGCGGGTGGCTGGCCACCACGGCCGCACGGGAGTGCCTGCGCATCCTGCGCGAGACCCGCACCGTCGTGCCGTTCGAGATCGACGTGCTGCCCGATCCCTGCCGCGCCGTCGAGGACCGCGTGGTCGACGCCGACACGGTGTCCCGCATCCACGACATCGTCGCGGCCCTGCCGCCGCGCGGCCGCACGGTGATGCAGGAGCTGTTCGCCGAGGAGCCCCGCCCCTACGCCGACGTGGCCCGCGCCACGGGCATCCCGGTCGGCAGCCTCGGGCCCACCCGCCAGCGGTTGCTGCGCCGCGTCCGCGCCACGTTCGAGGCCCCGGCAGTGGTGAGCGCCTGA
PROTEIN sequence
Length: 184
MTDTGIDVLLHNAARGDQRAWEEIVGRYRGLVGAVVRSFRLQEADARDAEQRTWLRLVENRARIRDPERLGGWLATTAARECLRILRETRTVVPFEIDVLPDPCRAVEDRVVDADTVSRIHDIVAALPPRGRTVMQELFAEEPRPYADVARATGIPVGSLGPTRQRLLRRVRATFEAPAVVSA*