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scnpilot_cont_500_p_scaffold_2524_25

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(25843..26382)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D135_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 175.0
  • Bit_score: 209
  • Evalue 3.20e-51
ribosome maturation factor rimP similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 175.0
  • Bit_score: 209
  • Evalue 9.10e-52
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 175.0
  • Bit_score: 209
  • Evalue 4.50e-51

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCCCTCCCCCCGCCCTGTGCAGCGTTCCGCCGGGCAGCAGCCCGACGGCCCACTGCACGGCGTGCTGGAACCGATCGTCACCGGCGCCGGGTTCGAGCTCGACGAGCTCGACGTCCGCGTCATCGGCCGCCGCCACACCATCAAGCTGGTGGTGGACTCCGACTCCGGCGTCGGGCTCGACGACATCGCGCACGTCTCCCGCGCCGCGTCCGAGGAGCTCGACAAGCACGAGCACCTCATCGGCGGGTCCTACACGCTCGAGGTGACCTCGCCCGGCGTCGACCGTCCGCTCACCTCACCGCGCCACTGGCGCCGCGCCCACCTGCGTCTGGTCGCCGTCCGCACCCGGGACGGCGGCACGCTCACCGGCCGGGTCGGCACGGCAGGCGAGGAGTCGGTGGAGCTGCTGGTCGCCGGCGTCAAGCGCCCGCTGCGCTACGCCGACGTCGAGCACGCCGCCGTCGAGGTCGAGTTCAACCACCCGCCCGCGGCCGAGCTCGCACTGCTTCAGGGGACCACCCCGGAGGGATCGCAATGA
PROTEIN sequence
Length: 180
MPSPRPVQRSAGQQPDGPLHGVLEPIVTGAGFELDELDVRVIGRRHTIKLVVDSDSGVGLDDIAHVSRAASEELDKHEHLIGGSYTLEVTSPGVDRPLTSPRHWRRAHLRLVAVRTRDGGTLTGRVGTAGEESVELLVAGVKRPLRYADVEHAAVEVEFNHPPAAELALLQGTTPEGSQ*