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scnpilot_cont_500_p_scaffold_3458_20

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 20491..21282

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 256.0
  • Bit_score: 383
  • Evalue 2.00e-103
Pseudouridine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLD5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 256.0
  • Bit_score: 383
  • Evalue 1.40e-103
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 256.0
  • Bit_score: 383
  • Evalue 4.00e-104

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGACTGATCAACGTCCGCCCATCGCCGACCATCCCGACGGCGTCCGCCTCCAGAAGGTGCTGGCCCAGGCCGGTGTCGCCTCCCGCCGCGCCGCCGAGGAGCTGATCGCCGAGGGGCGCGTCAGCGTCGACGGCAAGATCGTGCGCGAGATGGGCCGCCGGGTGCGTCCCGAGACCGCCGTCGTGCACGTCGACGGCTCGCGCATCGTCATCGCCGAGGGGCTGGTGCACCTCGCGCTCAACAAGCCGCGCGGCATCCTCTCCACGATGTCCGACGACCAGGGCCGCATGTGCGTCGGCGACCTCATCGTCGAGCGCGGCATCATGGACGAGCACTTCGACGGCGGCGCCCGCGGCCGGCTGTTCCACGTGGGCCGGCTCGACGCCGAGACCGAGGGTCTGCTGCTGCTCACCAACGACGGCGACCTCGGCCACCGGCTGATGCACCCCTCCTACGAGGTGGAGAAGACCTACCTGGCGGAGGTCATGGGCCAGGTGCCGCGTGACATGGGCAAGCGGCTCAAGGCCGGCGTCGAGCTGGAGGACGGTCTCGTGGCCGTGCACTCGTTCAAGCTCGTCGACTTCCACGCCGGCCGCTCCATGGTGGAGCTGGTGATCCACGAGGGGCGCAAGCACGTGGTGCGCCGGTTGCTCGAGGAGGTCGGGCACCCCGTGCAGCGGCTGGTGCGCACCGCCGTCGGCGACGTCCACCTGGGCAACCAGCGCCCCGGCAAGTTCCGGCCGCTGAACAGGACCGAGGTCGGCTCGCTGTACAAGTCCGTAGGGATGTAG
PROTEIN sequence
Length: 264
MTDQRPPIADHPDGVRLQKVLAQAGVASRRAAEELIAEGRVSVDGKIVREMGRRVRPETAVVHVDGSRIVIAEGLVHLALNKPRGILSTMSDDQGRMCVGDLIVERGIMDEHFDGGARGRLFHVGRLDAETEGLLLLTNDGDLGHRLMHPSYEVEKTYLAEVMGQVPRDMGKRLKAGVELEDGLVAVHSFKLVDFHAGRSMVELVIHEGRKHVVRRLLEEVGHPVQRLVRTAVGDVHLGNQRPGKFRPLNRTEVGSLYKSVGM*