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scnpilot_cont_500_p_scaffold_4326_10

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6866..7450)

Top 3 Functional Annotations

Value Algorithm Source
Putative signaling protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W3R9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 175.0
  • Bit_score: 124
  • Evalue 8.70e-26
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 170.0
  • Bit_score: 126
  • Evalue 3.20e-26
putative signaling protein similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 175.0
  • Bit_score: 124
  • Evalue 2.40e-26

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 585
GTGACGCGTGAGTACGGCGAGATCATCCCGCGTCTGCGTGCCGCGCTGAGGCTGGACGCGGCACCGGCTGCCGATCATGAGGTCCGCCGGCCGGGCCAGGCCGGGCTCTCGGTCGACTACCAGGTCATGGTCGACCTGATGAACGGTCGGTTGGTCGGGGTGGAGGCGCTGGCCCGCCTTCATGACCAGTGGGGGCGCGCCGTACCCCCCGTCGACTTCATCCCGGTCGCCGAGCGGACGGGGATGATCGGCCCGCTCGGGCGGCACGTACTGGAGACCGCTTGCACCGACCTGGCCGGATGGCATGCGCGGCATCCCACGGGGCGGCACCTCGGTGTCTCGGTCAATCTCAGCGCCCACCAGGCCGATCTCTCCGACGTCGCAGCCGAGGTGCGCGAGACTCTGCGGCGGACGGGCCTCGCGGCCGGGTCGCTCACTCTCGAGCTCACCGAGACCGCGATGCTCGATGCGGGCCATGCGGCCGTCCGTGCTCTGCACGAGCTCCGCGAGCACGGTGTCAAGATCGCCCTCGAGATTTCGGTACGGGATACGCGAGCCTGCGTCATCTCGCCCGACTGCCGGTGA
PROTEIN sequence
Length: 195
VTREYGEIIPRLRAALRLDAAPAADHEVRRPGQAGLSVDYQVMVDLMNGRLVGVEALARLHDQWGRAVPPVDFIPVAERTGMIGPLGRHVLETACTDLAGWHARHPTGRHLGVSVNLSAHQADLSDVAAEVRETLRRTGLAAGSLTLELTETAMLDAGHAAVRALHELREHGVKIALEISVRDTRACVISPDCR*