ggKbase home page

scnpilot_p_inoc_scaffold_712_38

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(38678..39151)

Top 3 Functional Annotations

Value Algorithm Source
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 146.0
  • Bit_score: 133
  • Evalue 3.60e-28
Lysozyme n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZWH7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 146.0
  • Bit_score: 133
  • Evalue 2.60e-28
Phage-related lysozyme similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 143.0
  • Bit_score: 111
  • Evalue 1.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGACCATCTCCACCGCCATTCAGACCGCCATTGACGCGCTGATTCGCCCGTTCGAGGGCTATCACCGCCGTCTGCCGGATGGCGGGTGCGCTGCTTACCCCGATCCAGCGACGAAAGCCGATCCTTGGACAATCGGCTACGGATCAACCGGCCCGGACATCAAGCCTGACACGCGCTGGACGCATGACCAGGCACTGGCCGCCCTTCGTTCCGAAACCACGCAGAAGGCGCTTGGGGTGCTCAAGCTGTCGCCGACGCTGGCCGCCGAGCCAGACCGCCGCATTGCTGCGCTGACCTCTTTTGCCTACAACTGCGGGCTGGGCAACTATCGCATCTCCACGCTTCGCCGTCGCGTCAAGCAGCGCGACTGGCCAGAAGCCGCGAAAGAGATTTTGAAGTGGGATAAAGCCGCAGGCCGCGTGATGGCGGGCCTGACTCGTCGCCGCGCAGCAGAGGCCGCTTTACTGAACTGA
PROTEIN sequence
Length: 158
MTISTAIQTAIDALIRPFEGYHRRLPDGGCAAYPDPATKADPWTIGYGSTGPDIKPDTRWTHDQALAALRSETTQKALGVLKLSPTLAAEPDRRIAALTSFAYNCGLGNYRISTLRRRVKQRDWPEAAKEILKWDKAAGRVMAGLTRRRAAEAALLN*