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scnpilot_p_inoc_scaffold_878_42

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(23763..24347)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI61_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 182.0
  • Bit_score: 255
  • Evalue 3.30e-65
Lytic transglycosylase catalytic subunit {ECO:0000313|EMBL:EIL99152.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 182.0
  • Bit_score: 255
  • Evalue 4.60e-65
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 173.0
  • Bit_score: 225
  • Evalue 1.00e-56

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCTGGGCGGCATGCAGTCATCGCCCGCTCCAGCCCCCGCCACCTCCACGCCGTTCCAGCTCGCCTGGGGCGCGCGCGTCAGCACCGACTTTGCCCGGCATCTGCTGGGCATCTGCAGCGAATTCGGCTGGGGTCGATCGCACGCCAACTGGCTGATGGCCTGCATGGCGTTCGAATCCGGCGAGACGTTCCGCGCTGACGTACGCAACGCCGCCGGCAGCGGCGCAATGGGCCTGATCCAGTTCATGCCGGCCACCGCGCGCGACCTTGGCACCACCACGGAAAGCCTGGCGGCCATGACCGCCGAGTCGCAGCTGATCTATGTGCGGGCGTACTTTCGCCCCTACGCGCGTCGCATCCAGAGCCTGAGCGACATGTACATGGCCATCCTGCTGCCGAAATACATCGGCACCGCGGAGGGCACCGTGCTGTTCTCCGGCACCGGCGCCAGCTACCGGCAAAACGCCGGGCTGGACGCGAACTCCGACGGAAAAATCACAAAGGGCGAAGCCACCGCACGAGTGGCCGCCATGCTGCAGCGTGGGCTGGAACCGGCCAACGCTGCTGCTTACGTGTGGCCGTAG
PROTEIN sequence
Length: 195
MLGGMQSSPAPAPATSTPFQLAWGARVSTDFARHLLGICSEFGWGRSHANWLMACMAFESGETFRADVRNAAGSGAMGLIQFMPATARDLGTTTESLAAMTAESQLIYVRAYFRPYARRIQSLSDMYMAILLPKYIGTAEGTVLFSGTGASYRQNAGLDANSDGKITKGEATARVAAMLQRGLEPANAAAYVWP*