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scnpilot_p_inoc_scaffold_891_39

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(46505..48664)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraG n=1 Tax=Pseudomonas putida RepID=UPI000310B4A0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 719.0
  • Bit_score: 1356
  • Evalue 0.0
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:GAO21706.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 719.0
  • Bit_score: 1384
  • Evalue 0.0
conjugal transfer protein TraG similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 719.0
  • Bit_score: 1356
  • Evalue 0.0

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2160
ATGGCCCAGCCCCACTCCGTCGAGGTACTGCTCCGGCCAGCGGTGGAGCTTTACACCGTCGCGGTGTGTGTCGGCGCCGCGCTGCTGTGCCTGGTGGCGCCGTGGTCGCTCGCGCTGAGCCCCTTGCTGGGCCTGGGCAGCGCGCTCGCGTTTCTCACCTTCGGCGCCATCCGCTGGCGGGATGCCTGGGCCATCCTGCGCTACCGGCGCAACATCCGGCGGTTGCCACGCTACGTGATGACCAGCCGCGATGTGCCGGTCAGCCAGCAGCGGCTGTTCATCGGCCGGGGCTTTCGCTGGGACCAGCGCCACACGCACCGGCTCGTGCAGACCTACCGGCCGGAGTTCCGCCGCTACGTCGAGTCGATGGCAATTTACCGCGCGGCGCGGCGCATCGAGGAGCGGTTGGAGTTCGCACCATTTCTGGTCTCGAAGCTGGCGAAAGCCCTGGCCTGGGACAGCCTGCTCAATCCAGCGCGCCCGCTGCCGCCGGTCGGAGGGTTGCCGCGACTGCACGGCATCGAACCGAACGAGGTCGACGTCAGCCTGCCGTTGGGCGAACGGGTGGGCCACTCGCTGGTCCTGGGCACCACGCGCGTGGGCAAGACTCGCCTGGCCGAACTGTTCATCACCCAGGACATCCGCCGCAAGGTGGGCGGCCAGCACGAGGTGGTGATCGTCTTCGACCCGAAGGGCGACGCCGATCTCCTGAAGCGCATGTACGTGGAAGCCAAGCGCGCGGGGCGCGAGGGCGAGTTCTACGTCTTCCATCTGGGCTGGCCGGACATCTCGGCGCGCTACAACGCCGTGGGCCGGTTCGGCCGTATTTCCGAGGTGGCCACGCGCGTCGCGGGCCAGCTCTCGGGCGAGGGCAACAGCGCCGCGTTCCGCGAGTTCGCCTGGCGCTTCGTCAACATCATCGCACGCGCCTTGGTGGAACTGGGGCAGCGCCCTGACTACCTGCTGATCCAGCGTCATGTCATCAACATCGACGCACTGTTCATCGAGTACGCCCAGCACTTCTTCGTGAAGAACGAACCGAAGGCCTGGGACATCATCGTCCAGCTCGAAGCCAGGCTGAACGACAAGAACATCCCGCGCAACATGATCGGGCGCGAGAAGCGCGTCGTGGCGCTGGAGCAGTACCTCTCGCAGGTGCGGGTCTACGACCCGGTGCTCGACGGCCTGCGCAGCGCAGTCCGCTACGACCGGACCTACTTCGACAAGATCGTCGCGTCGCTGCTGCCGCTGCTGGAGAAGCTGACCACCGGCAAGATCGCCCAACTGCTCGCGCCGAACTATTCAGACCTGGCCGACCCGCGGCCGATCTTCGACTGGATGCAGATCATCAGGAAGCGCGCGGTAGTCTATGTCGGATTGGATGCGTTGTCCGACGCGGAAGTCGCCGCAGCCGTCGGCAACTCGATGTTCAGCGACCTGGTATCGGTCGCCGGGCACATCTACAAGTTCGGCATCGACGATGGCTTGCCGGGCGCAGCGGCCGGCGAGAAGGTGCCGATCAACGTGCACGCCGACGAATTCAATGAGCTGATGGGCGACGAGTTCATCCCGATGATCAACAAGGGCGGCGGTGCAGGCGTCCAGGTCACGGCCTACACGCAGACGCTCTCGGACATCGAGGCGCGCATCGGCAACCGCGCCAAGGCCGGCCAGGTGATCGGCAACTTCAACAACCTGTTCATGCTGCGCGTGCGCGAGACCGCCACTGCGGAATTGCTGACCCGGCAGTTGCCCAAGGTCGAGGTATATGCGACGACGGTGATGAGCGGCGCGACCGATAGCTCCGACCCCACCGGCAACACCGCCTTTACCTCCAACACGCAGGACCGCATCACCACCACCAGCGTGCCGCTGATCGAGCCGTCGCATGTCGTCGCGTTGCCCAAGGGGCAGTGCTTCGCACTGATCGAGGGCGGCAACCTATGGAAGGTTCGCATGCCGCTGCCGGCGCCCGACCCCGACGAGGCGATGCCGAAGGATCTTCAGGAGCTGGCCGGCTACATGCGGCAGCATTACGTCGAGGCCGGCGACTGGTGGGAGAACCAGGGCTTGCCCCGCCTGCAGGACAGCGCACTGCCGGCCGACCTGGTGGACGACTTCAAGCAGATGGCGGGCGATGCCGCGGAGGCCGAGGCATGA
PROTEIN sequence
Length: 720
MAQPHSVEVLLRPAVELYTVAVCVGAALLCLVAPWSLALSPLLGLGSALAFLTFGAIRWRDAWAILRYRRNIRRLPRYVMTSRDVPVSQQRLFIGRGFRWDQRHTHRLVQTYRPEFRRYVESMAIYRAARRIEERLEFAPFLVSKLAKALAWDSLLNPARPLPPVGGLPRLHGIEPNEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFITQDIRRKVGGQHEVVIVFDPKGDADLLKRMYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDYLLIQRHVINIDALFIEYAQHFFVKNEPKAWDIIVQLEARLNDKNIPRNMIGREKRVVALEQYLSQVRVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLEKLTTGKIAQLLAPNYSDLADPRPIFDWMQIIRKRAVVYVGLDALSDAEVAAAVGNSMFSDLVSVAGHIYKFGIDDGLPGAAAGEKVPINVHADEFNELMGDEFIPMINKGGGAGVQVTAYTQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYATTVMSGATDSSDPTGNTAFTSNTQDRITTTSVPLIEPSHVVALPKGQCFALIEGGNLWKVRMPLPAPDPDEAMPKDLQELAGYMRQHYVEAGDWWENQGLPRLQDSALPADLVDDFKQMAGDAAEAEA*