ggKbase home page

scnpilot_p_inoc_scaffold_1260_11

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(18987..19586)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VW86_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 190.0
  • Bit_score: 216
  • Evalue 2.30e-53
Transcriptional regulator, y4mF family {ECO:0000313|EMBL:EWS52755.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.; similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 207.0
  • Bit_score: 228
  • Evalue 8.00e-57
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 190.0
  • Bit_score: 216
  • Evalue 6.30e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylibium sp. T29 → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCAGCTCGGACAGCGCCTCAGGCGCATCCGTATTCGTCAGGGACTGACCACGGTTCAGACTGCCAAAGACGCGGGTCTATCGCGAATGACGCTCCGTTCGATTGAGGCCGGAGAGCCAACGCCCAGCATCGGCGGTTACATGCGCGTGATGCGGGCACTAGGTGTCTCGAAAGACCTCGCACTCCTGGCGATGGACCCCGTGCAGGACCCTCGTCAACCATGCGATGCGGTGGCTCGCGCTGAGCATCCAGCCGCAACGGTCAGCAACGCGCGGCATGAACTGCAAGACCTCCAAAGTCTCGCTTTGCACCAAGAAGCCGTGCGGCGCATGAAGCACGACCCGCGCCTCGTCAACCAGGCCATGGATACGCTGAACCGATGGCGCTCCGAGGGGGGCTCCCGCTCAGAGCATCTCTGGGACGAGTGGGCGGTCATCCTTGAGAAAAGAGCTTGGCGACGCGCGCTTTCGCACACTCAACGAGCGCAAGAGCTGCGCCAAGCGTCACCGCTCGCAACCGTGCTGCCTGAGGAGGCTCGGCGGCGGATTCTGAAAGAGGTTCGAAGCATCAAGGCGGGAGATACCTCCCAGCCGCCATGA
PROTEIN sequence
Length: 200
MQLGQRLRRIRIRQGLTTVQTAKDAGLSRMTLRSIEAGEPTPSIGGYMRVMRALGVSKDLALLAMDPVQDPRQPCDAVARAEHPAATVSNARHELQDLQSLALHQEAVRRMKHDPRLVNQAMDTLNRWRSEGGSRSEHLWDEWAVILEKRAWRRALSHTQRAQELRQASPLATVLPEEARRRILKEVRSIKAGDTSQPP*