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scnpilot_p_inoc_scaffold_815_32

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(32139..33506)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VP13_CAUST similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 456.0
  • Bit_score: 254
  • Evalue 2.20e-64
Cation efflux system protein CusC {ECO:0000313|EMBL:EWS62080.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 467.0
  • Bit_score: 411
  • Evalue 2.00e-111
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 456.0
  • Bit_score: 254
  • Evalue 6.30e-65

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Taxonomy

Methylibium sp. T29-B → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGACCCGATCGAAGTCCCCCTGGCGCTGGACGGCCCTGGCCGCAGCGGCCCTGCTCGCCGGCTGCGCCGCACCGGGCACAGCGACCCTCGACCTGACCAAGTCGGACGCACCGCGATTCGCAGGCGCCCCCGAGCTGCCCCGCAGTGCACCCGCGGCCCGCTGGGGCGCCTTGGGTGACACCGCGTTGATGCACCACATCGCGCGCGCGCTCGCCGGCAACCTCGACGTCGCGCAAGCAGTGGAGCGCGTGCAACGCTCGCGTGCCCTGGCCGCTGCCGCGTCGGCCGCGCGATGGCCGGCGCTTGATGCCACCGTGGGCGCCAGCGAGCGCGAAGACCGGCAGCGCAGCGGCAGCACCAGCGCCGGCATCGACCTGGCCTGGGAGGTCGACGTGTTCGGGCGCCTGCGCAACGCAAGTCATGCACAGCGGTTGCGTAGCGACGCCTCCGTGGCAGACGCCGAAGCGGTGCGCCGCGCGGTGGCGGCCGAAGTGGCCCAGGCCTGGTACGCGCTGGCCAGTGCGAACGAGCGCCTGGCGCTCACACAAGCGGTCATCGAGAACCGCCGGGCCACACTGGCCCTGGTGCAGCACCGTGCGCGCGCCGGCCTGAGCGCGCCACTGGACGAAGCGCGCGCGCGCAGCGATCTGGCCGCCGTGCAAGCCGATGTGCCAGCCTTGCAGGCCCAGGCCACGCAGGCCATGAACCGCCTCGCCGTGCTCGCGGGCGACACGCCCGGCGCGCAGGCCATCCCTGCAAGCGACAGCGCCCCCGCGGATCCGGCTGCGATTACCCTGGGCCTGCCGGACGGCGAGACCTGGCTCGCGTCGCGTCCCGACATCGCGGCGGCCGAAGCCCGTCTGCAAGCCCTGGCCATGGATGCCGAGGCGGTACGCGCCGAGTTCCTGCCTCGCATCTCGGTGGGCGGCTTCGTCGGCTGGCTGGCCGGGTCGGCCGTCGGCCTGAGCTCGGCCGGCACGGGCGCCTGGTTGATTGCGCCTTCGATCAGCCTGCCGGTGTTCAATGCCGGACGACTGCAGGCCCGCCTGGACGCCGCACGCGCCCAGGAACGCGAGGCCCTGCTCCACTACCGGCAGCGCGTGTTGCTGGCCACCGAAGAGGTGGAGAACGCGCTGGCGCAGGTGAGCTTCGGCCGCGCCCGCCTGACGGCACTGCAGGAACGCAGCCGCGAAGCGGTGCGCGCGGAGCAACTGTCGCGGCTGCGCTACCAGAGCGGTGCGTCCGATCTGCTGGAACTGCTCGACGCGCAACGCAGCGCGCAGCAAGCCCAGCTGGGTTTGGCCGAGGCGCTCGGGCAGCACCGTCAGGACGTGGCCTTCCTGCTTCGCGCGCTGGGCGCGGTCTGA
PROTEIN sequence
Length: 456
MTRSKSPWRWTALAAAALLAGCAAPGTATLDLTKSDAPRFAGAPELPRSAPAARWGALGDTALMHHIARALAGNLDVAQAVERVQRSRALAAAASAARWPALDATVGASEREDRQRSGSTSAGIDLAWEVDVFGRLRNASHAQRLRSDASVADAEAVRRAVAAEVAQAWYALASANERLALTQAVIENRRATLALVQHRARAGLSAPLDEARARSDLAAVQADVPALQAQATQAMNRLAVLAGDTPGAQAIPASDSAPADPAAITLGLPDGETWLASRPDIAAAEARLQALAMDAEAVRAEFLPRISVGGFVGWLAGSAVGLSSAGTGAWLIAPSISLPVFNAGRLQARLDAARAQEREALLHYRQRVLLATEEVENALAQVSFGRARLTALQERSREAVRAEQLSRLRYQSGASDLLELLDAQRSAQQAQLGLAEALGQHRQDVAFLLRALGAV*