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scnpilot_p_inoc_scaffold_1033_18

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(12247..12966)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V471_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 239.0
  • Bit_score: 436
  • Evalue 1.30e-119
  • rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EFI52751.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 239.0
  • Bit_score: 435
  • Evalue 5.20e-119
putative cytochrome c-type biogenesis protein; putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 236.0
  • Bit_score: 237
  • Evalue 3.20e-60

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGTCCGCGAATCTCGCGCTGGGCTACGCCGCCGGCGCCCTATCGACGCTCTCGCCGTGCGTGCTCCCGATCCTACCGATCGTGCTGTTCGGTGCGCTCGAGCGGCATCTCTGGGGACCGGTCGCGCTCGCTGCGGGACTGGCGGCGTCCTTCGCCGGCGTCGGCATCACGCTGGCATCGGTGGGTTTCAGCGTCGGCATAGACCCTGAAACGTTGCGGCTTGCCGTGGCCGCGCTGATGGGCGCCGCTGGGGTGATCCTTCTTGTGCCGGCGCTTCAGGGCGGGGTGGCCGCGATGGTGTCTCCCGTAGCCGGCAAAGGCCAGATCCTGCTCGACCGCCTTCAGCCGACCGGTATCTGGGGCCAGTTCGCGCTCGGAGCCGCGCTTGGCGTGATCTGGTCGCCATGTTCGGGGCCGACGCTCGGCGCGGCTATCGGTCTTGCGGCCCAGGGCGACGATCTCGGCAGGGCAGCAGCGACGATGTCCGCCTTCGCGCTCGGAGCGGCGACGCCCATTCTTCTGCTCGCCTACGGTTCGCGGCAGGCGATCATGGCACGGCGGGATTGGATGGCGCGAGCGTCGCGCATCGGAAAACCTCTGATGGGTGCCGCCTTCTTCGGCATCGGACTCTTCGTACTCACCGGTCTCGACAAGATCGTCGAGACCTCGCTGACGAACGCCATGCCGGAATGGCTGGCGAACGTGACGACGCGTCTGTGA
PROTEIN sequence
Length: 240
VSANLALGYAAGALSTLSPCVLPILPIVLFGALERHLWGPVALAAGLAASFAGVGITLASVGFSVGIDPETLRLAVAALMGAAGVILLVPALQGGVAAMVSPVAGKGQILLDRLQPTGIWGQFALGAALGVIWSPCSGPTLGAAIGLAAQGDDLGRAAATMSAFALGAATPILLLAYGSRQAIMARRDWMARASRIGKPLMGAAFFGIGLFVLTGLDKIVETSLTNAMPEWLANVTTRL*