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scnpilot_p_inoc_scaffold_1033_39

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 29632..30204

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6Z2_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 190.0
  • Bit_score: 258
  • Evalue 6.40e-66
Transcriptional regulator LysR {ECO:0000313|EMBL:GAJ30043.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 190.0
  • Bit_score: 264
  • Evalue 1.30e-67
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 190.0
  • Bit_score: 258
  • Evalue 1.80e-66

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Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGGACGTTGGTTCAGTTGGGCGTGGTGAAGCGGGCACCGTGCGCATCGGGATATTTTCCTCGCTTGCATCTGGCTTTCTCGCCGATCTCCTCCGCGCCTATGCTGCGGCAAACCCAGCCATCCGACCCGATCTGATTGAAGGCGGGCCCTCCGGCCACATCGCCGCGATTCAACGATATCACCTGGATGTCGCCTTCCTGACCGGTGAGCCGATCGCCGACGGATGCGATCTGGTGCATCTTTGGAATGAGCGTGTCTTCGTAGCATTGCCAGACGACGACGACCTGTCTCGAAATCGCGAGATTTCTTGGACGGACCTGCGAGACCGACGCTTTATCGTCAGTGAGACCGACCCGGGTCCGGAGATCCACGACTACCTGGTGAAGCACCTCGCTGACCTTGGGCACCACCCCAACGTCGAACGTTGCCGTGTCGGTCGAGACAATTTAATGAATCTCGTCGCCATGGCTCAGGGCCTCACGCTGACCAGCGAAGCGACTATCGCGGCGCGCTTTCCCGGCGTCGTCTACCGCCCACTCAGCCAGGAGATTCTGCCGTTCTGCGCGATTTGG
PROTEIN sequence
Length: 191
MDVGSVGRGEAGTVRIGIFSSLASGFLADLLRAYAAANPAIRPDLIEGGPSGHIAAIQRYHLDVAFLTGEPIADGCDLVHLWNERVFVALPDDDDLSRNREISWTDLRDRRFIVSETDPGPEIHDYLVKHLADLGHHPNVERCRVGRDNLMNLVAMAQGLTLTSEATIAARFPGVVYRPLSQEILPFCAIW