ggKbase home page

scnpilot_p_inoc_scaffold_1696_13

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(10626..11510)

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=2 Tax=Pandoraea RepID=V5UAD1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 263.0
  • Bit_score: 352
  • Evalue 3.90e-94
  • rbh
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 263.0
  • Bit_score: 352
  • Evalue 1.10e-94
  • rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:AHB04879.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandor similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 263.0
  • Bit_score: 352
  • Evalue 5.40e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGGCGGACATCGACAAGGCGGGCGGATCGGAGAAAAAGCGGCCGGGCACTCGGTCTGAGCGAGACGAGGGCGCTGCCGTCGGATCGCTCTCCCGGGGGCTCCAGATCCTCGACGTGCTCACGCAAGCGCCCGGCTGGCTCTCGCTGTCCGACATCGCTGCCGAGACCGGCCTCGATGCCAGCACCGCGCATCGATTGCTCCAGACGTTGATCGAGACCGGCCATGCCGTGCGCGATGACGCGCTCAAGCGCTACCTGCCGGGCCCCCGCGCGCTCTCGCCGCTTTCGCTGTTCCACCCGCTGACGCAACTCCGCCGCGAAGCCGTGCCGGTGCTGGAGTTCGTCCAGTCGCAGATCGGCGAGACCTGTGCGTTCGTCCTGTTCCTGGGGCAGGAGCGCCTGGTGGTGGACTTCGTGCGCGGCACCCACCCGCTCTCGCCGTACTACGACACCTGGCTGAAGAGTCCGCTGCACGGCTCGGCCTCGGGGAAACTGCTGCTGGCGTGGATGCCCGAGACCGAGCGGGCCGAACTGATGGGCCCCGGCCCCTATGCCGCGCACACCGCCAAGACCATCACCTCGCCCGAGAAGCTCGAGGCCGACCTGAAGTCGGTGCGCCAGAAAGGCTACGCCGTTGCCCGTGAAGACGCGTACGAAAGCCTGGTCGCGCTGGGCGTTCCGCTGACCTTCCAGCGCGACGCGCAGCCCGTGGGCTGTCTGGTCGTCACCTCGCCCAGCAACTCGCTCGCACCCGCGGCCGAACCCAGGGTGTGCGAACAGCTCCGAGCCGCGGCCACGCTGCTGATGAACGGCGCGCCCACGATGCAGGTATTTCGCCAGTGGGCGGCGCGAGGCATCCGACGGGGTGCCGCCACCCTGACCTGA
PROTEIN sequence
Length: 295
VADIDKAGGSEKKRPGTRSERDEGAAVGSLSRGLQILDVLTQAPGWLSLSDIAAETGLDASTAHRLLQTLIETGHAVRDDALKRYLPGPRALSPLSLFHPLTQLRREAVPVLEFVQSQIGETCAFVLFLGQERLVVDFVRGTHPLSPYYDTWLKSPLHGSASGKLLLAWMPETERAELMGPGPYAAHTAKTITSPEKLEADLKSVRQKGYAVAREDAYESLVALGVPLTFQRDAQPVGCLVVTSPSNSLAPAAEPRVCEQLRAAATLLMNGAPTMQVFRQWAARGIRRGAATLT*