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scnpilot_p_inoc_scaffold_2484_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3563..4312)

Top 3 Functional Annotations

Value Algorithm Source
short chain dehydrogenase (EC:1.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 241.0
  • Bit_score: 244
  • Evalue 2.70e-62
Short chain dehydrogenase {ECO:0000313|EMBL:ABG93464.1}; EC=1.1.1.- {ECO:0000313|EMBL:ABG93464.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 241.0
  • Bit_score: 244
  • Evalue 1.40e-61
Short chain dehydrogenase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SG72_RHOSR similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 241.0
  • Bit_score: 244
  • Evalue 9.70e-62

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Taxonomy

Rhodococcus jostii → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGCAAGGAGACGCGAGGAACGGTGATCGTGACGGGAGGCGGCAGAGGCATCGGTGCCGAGGTCGTCCAACTGTGTGCCCAGGCTGGCCACGACGTCTTGTTCACCTATGTCAGCAAGCCCCATCGGGCCCGGGAGGTGGTGGACCGGTGTGTACCTTACGGCGTGAAGGTGGTGGCCGTGCAGGCCGACGTTCGGGATCCCATGCTGGCCAACGCAGTGGTGGAGCAGGCAGAGAGACTCTCCGCCGTGATCGGGCTGGTCAACAACGCCGGCATCACCAGCCGGATCGGATCATTCCTCGATGTGGACATCGACACCATGCGCGACGTACTGGACGTCAACGTGCTCGGCACGATGGTGATGTGCCAGGCCGTTGTACGGCACTGGGTTGGGCGTGGTTCGGGTGGCAGCATCGTCAACGTGTCCTCCATCGCTGCCACGCTGGGCTCGCCCGGGGAGTACATCCACTACGCGGGGTCCAAAGCGGCCGTCGAAGGCTTCACCATCGGACTGGCCAAGGAGTTTGCGGACCAGGGCATCCGCGCCAACGTGGTTTCGCCAGGGACCACCGACACCGAAATTCATGCCCTCTCGGGCGAGCCCGGCCGGGCCGAGCGTGTCGCGCCAAAGATTCCGATGAAGCGGGCAGGGGACCCGCGCGAGATTGCGGAGGCCATTGCCTGGATGCTCTCGGACAAGGCGTCCTATGTCACTGGCACGGTGCTGCGTGTCGCCGGGGGACTTTGA
PROTEIN sequence
Length: 250
MSKETRGTVIVTGGGRGIGAEVVQLCAQAGHDVLFTYVSKPHRAREVVDRCVPYGVKVVAVQADVRDPMLANAVVEQAERLSAVIGLVNNAGITSRIGSFLDVDIDTMRDVLDVNVLGTMVMCQAVVRHWVGRGSGGSIVNVSSIAATLGSPGEYIHYAGSKAAVEGFTIGLAKEFADQGIRANVVSPGTTDTEIHALSGEPGRAERVAPKIPMKRAGDPREIAEAIAWMLSDKASYVTGTVLRVAGGL*