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scnpilot_p_inoc_scaffold_5246_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 5239..5943

Top 3 Functional Annotations

Value Algorithm Source
ompR1; Transcriptional regulatory protein ompR id=12498545 bin=THIO_MID species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 230.0
  • Bit_score: 348
  • Evalue 4.50e-93
ompR5; Transcriptional regulatory protein ompR Tax=GWE2_Gallionellales_58_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 236.0
  • Bit_score: 116
  • Evalue 4.00e-23
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 236.0
  • Bit_score: 114
  • Evalue 3.10e-23

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Taxonomy

GWE2_Gallionellales_58_10_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
GTGCCCGCCATCTTTGCCCCGCGCATTTGCCTGGTCGACGCCGATCCGGCGGCCCGGGCTGCGCTCGCGGATTATCTGAGCGACAAAGGTTTCGAGATCGTCGCGCCTGCCGACATGGATGTTCCGCCGGCGTTTGTCGACGTCCTGATCGTCGCGCTGGACGCCTCGGGTCAGCGAACACACAGGCCGAAGTGGCTTTCGCAAAAGCCGGAAGTACCGACGATCGTCCTGGATCGAGCGCATGTCTTTGCGGGGCGGGCCGGGCCCCTCGGTTTCACGCCCGATGCCAGACTGTCTCTGCCAGTCAACCCGCGCAGACTGATCGCCACGATCAGACGGGTTCTGAGCCTGGCACGAGTCGAGTCCGTCGATCCACGAGAGGCGCCTGAGTGCGTATACAGTTTTTCCGGGTGGAAGCTTTATCCTGATCGCCGACTCGAGTCGTTCGATGGGAAAACCGTCGTGCTCGAGAAACGGGATTTCGAACTCTTGAAAGTGATGCTGACCTTCCCTCGCCAGCTGCTTACCCGGCAACAATTGATTGCCATGGTCTGGGGCTCAGCTGCGGCAATCAAGAACAGGACGCTGGATCGTTCCATAACGCACCTGCGCCGCCACTTGGGTGATGACGTCAGGTTTCCGGTGCTCCTCAAGACAGTCGTTGGTGTGGGCTATCGACTCGAGGTGGATGTCGAAAAGTTGTAG
PROTEIN sequence
Length: 235
VPAIFAPRICLVDADPAARAALADYLSDKGFEIVAPADMDVPPAFVDVLIVALDASGQRTHRPKWLSQKPEVPTIVLDRAHVFAGRAGPLGFTPDARLSLPVNPRRLIATIRRVLSLARVESVDPREAPECVYSFSGWKLYPDRRLESFDGKTVVLEKRDFELLKVMLTFPRQLLTRQQLIAMVWGSAAAIKNRTLDRSITHLRRHLGDDVRFPVLLKTVVGVGYRLEVDVEKL*