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scnpilot_p_inoc_scaffold_5140_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 4115..4447

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FAEE similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 211
  • Evalue 5.30e-52
Putative plasmid maintenance system antidote protein {ECO:0000313|EMBL:GAK68846.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 109.0
  • Bit_score: 194
  • Evalue 9.30e-47
plasmid maintenance system antidote protein similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 110.0
  • Bit_score: 187
  • Evalue 1.70e-45

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGAGTGCGATGCAGGGCATCCGTATGAAAAATCCCGCCCATCCCGGCGGCTTTGTCAAAAGTGAGATCATCGAGCCGCTTGGCCTTTCGGTGACGAGCGCGGCGCAAGTTCTCGGTGTTACGAGGGCAGCGTTATCGGCCGTCCTAAACGAGCGCGCGCATCTTTCGCCGGAAATGGCGCTCCGGGTGGAAAAGGCTTTCGGTGTGTCGATGGATACGCTCATGCGGATGCAGAACAGCTACGACATTGCCCAGGCCCGCAAGCGGGAAGGGGAGATCAACGTCGCTCCCTTCAAGGGAAAGCCGCTCGATCCGCAAGCGGCTTTGATCTGA
PROTEIN sequence
Length: 111
MSAMQGIRMKNPAHPGGFVKSEIIEPLGLSVTSAAQVLGVTRAALSAVLNERAHLSPEMALRVEKAFGVSMDTLMRMQNSYDIAQARKREGEINVAPFKGKPLDPQAALI*