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scnpilot_p_inoc_scaffold_6359_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(2143..3093)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138W1_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 315.0
  • Bit_score: 264
  • Evalue 1.10e-67
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 315.0
  • Bit_score: 264
  • Evalue 3.20e-68
Secretion protein HlyD {ECO:0000313|EMBL:ABE39378.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 315.0
  • Bit_score: 264
  • Evalue 1.60e-67

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGAATCAAAGGCTACTCATTACCTCGCTCTTGGCGGTGATCTGCTTCCTCGGGAGCGTAAGGAGTGCTACCGCCGAAGGCGGCAGCGAACACGGCCACGGCGAAAACGAAAGCGCGCACGAACACGAAGAGGAGGGCGTCGTGACGCTCTCCCCCGAAGCCTTGGCGGCGGCGAAGGTTGAGGTGAAGGAAGCAGGCCCCGCAACGCTTCGGGTCACGCTTAAGGTCAACGGCCGCATCGAACCGGTTTCCTCGAAGGTGGCACACATCTCACCGCGCTTCCCCGGCATCATCCGCGAGGTGAAGCGAGACGTCGGCGACTACGTTGAATCGGGCGAACTCCTGGCCGTCGTCGAGAGCAACCAGTCGCTCCAAGCGTATGAGGTGCGTGCCTCGAAGCCCGGACTCATCACCGATCGTCACGCCACCTTGGGCGAGTCGGTGCAGTCGAACGAGCCGCTCTTCATCCTGATGGACTTAAGCCAGGTCTGGGCGGACTTCACCGTGTTCCAACGCGACGTGGCAGAGCTCAAAGCCGGTCAGAGCGTGAACATCCGCGTGTCGGGCACTTTGGATCCGATCAAGAGCACGCTCCACTTCATCTCTCCCGTCGTGGACGAGGCGACCCAGTCGCGGGTCGCGCGAGCGGTGGTGCCGAACTCCGACGGGCGGCTTGCGCCGGGGGCGTTTATCACGGGCGAGATCGCCACCGGGTCGTTTCCGGTGCCGATCGCTGTTTTAGATGACGCGATTCAAACCATCGACGGAGCAGCGGTCGTTTTCGTCTCAGAGGGCGAACGCTTCGTGAAGCGAGAGGTCAGAACAGGCCGCACCGACGGTGAGCTCACCGAAGTCGTCTCCGGCTTAACACCGGGCGAGCGCTACGCGGCCCGCAATTCCTTCATTCTCAAGGCAGAGATCGGGAAAGGGGAAGCGGAGCACGAAGACTAA
PROTEIN sequence
Length: 317
MNQRLLITSLLAVICFLGSVRSATAEGGSEHGHGENESAHEHEEEGVVTLSPEALAAAKVEVKEAGPATLRVTLKVNGRIEPVSSKVAHISPRFPGIIREVKRDVGDYVESGELLAVVESNQSLQAYEVRASKPGLITDRHATLGESVQSNEPLFILMDLSQVWADFTVFQRDVAELKAGQSVNIRVSGTLDPIKSTLHFISPVVDEATQSRVARAVVPNSDGRLAPGAFITGEIATGSFPVPIAVLDDAIQTIDGAAVVFVSEGERFVKREVRTGRTDGELTEVVSGLTPGERYAARNSFILKAEIGKGEAEHED*