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scnpilot_p_inoc_scaffold_5558_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 4817..5602

Top 3 Functional Annotations

Value Algorithm Source
Cystine-binding periplasmic protein FliY n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRH1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 261.0
  • Bit_score: 492
  • Evalue 2.80e-136
  • rbh
Cystine-binding periplasmic protein FliY {ECO:0000313|EMBL:EYR77409.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 261.0
  • Bit_score: 492
  • Evalue 3.90e-136
family 3 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 261.0
  • Bit_score: 368
  • Evalue 2.20e-99

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGCTGAAGACCATTCTGTCCTATGCCGTGGCCGCGGGCCTTGCCTTTTCCGCCTTCGGGATGCCGCTTGCCGCGAGCGCGGACGACCTCGAGACCATCAAGGCCGCCGGAGAATTCAGGTTCGCCAACAGCGGTGCCTATCCGCCCTTCAGTTTTGTCGACGACAGCAACCAGACGGTCGGCTTCGACGTCGATATCGGCAACGAGATCGCCAAGCGCCTCGGTGTGAAGGGCGCCGGTGTCAGCACAGCCTGGGACGGTATCATTGCCGGCCTGCTTGCCGGCAAATACGATTCCGTCATCGGCAGCATGACAATCACCCCGGAGCGTGAAAAGGCCGTCGATTTCGTCGGTCCCTATTACAAGTCGGGTCGTGGCGTCTTCGTCATCGAGGGCTCCGAGATCAGGTCGATCGACGATCTCAAGGACAAGACCATCGGTGTGACGCTCGGTGAAACCCACGAGAAATGGGCACGCGAGCGCGGCGGCTGGGAAATCCGCACCTACAAGGGGCTGCCGGAACTTTTCCTCGAACTGAAAGCCGGCCGTATCCAGGCAATGATCGTCGATGCCGTACCGGTGTCGATCGCCGTCAAGGAAACGGGCGAAAAGGTCACAAAGCTCGATGTGCCGGAATTCGCCGGGAGCGAGGACAAGATCGGTATTGCCATCCGCAAGGGCAATCCGGAGTTGAAAGCCGCCATGCAGAAGGCGCTCGACGACATGATGGCTGACGGTACCTATGAGGCCATCGCCATGAAGTGGGTCGGCTCGGACATCCGCTGA
PROTEIN sequence
Length: 262
MLKTILSYAVAAGLAFSAFGMPLAASADDLETIKAAGEFRFANSGAYPPFSFVDDSNQTVGFDVDIGNEIAKRLGVKGAGVSTAWDGIIAGLLAGKYDSVIGSMTITPEREKAVDFVGPYYKSGRGVFVIEGSEIRSIDDLKDKTIGVTLGETHEKWARERGGWEIRTYKGLPELFLELKAGRIQAMIVDAVPVSIAVKETGEKVTKLDVPEFAGSEDKIGIAIRKGNPELKAAMQKALDDMMADGTYEAIAMKWVGSDIR*