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scnpilot_p_inoc_scaffold_6644_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 5069..6238

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9X5M7_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 326.0
  • Bit_score: 344
  • Evalue 1.10e-91
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJB04106.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 326.0
  • Bit_score: 344
  • Evalue 1.50e-91
sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 319.0
  • Bit_score: 331
  • Evalue 4.50e-88

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGTCGGCTGCGGTGACAGACTTCCGCAACCATATCGCGCAAAATCCGCCCTATCGCGCCCAAACCGTCATAATCGGCCAGCAGGATAGGTGTTTCGCCCAAGGCCGTATCGAGTTTGGAAACGTTTTCAGTGCAGCAATTCACTGGAGCGACAGGACCAGAACAGTCCGCGCCGAAATGGGGGCTTTAATGCTTGATGTTGTGCGGTCCTGGTTTTCCGTGCCCCGAGACAATCCGGAGCTGCTGCGTGCGCAATATGCAGCATTCTCCAAGCAGGTGCCCCTGCTCTACACCATCCTCGTCATCAATACCTGGGGGCTGGCGACGACCCATATCGGTCTGGCGCCGGATTGGCTTGCCATTCTGCTGCCCACTGCGCTGACCCTGGTCTGCATCATCCGCTGCATCAGCTGGTGGCGTAGCCGCAGCTATGTCCCCAGCAGCGGCGAAGCCTACCAGGCCCTGACGCGCACCAATCGGCTGACGGCTATTCTCGGCGTCATGTTCGTTGCCTGGAGCTTGTCGCTCTATTCCTATGGCAATGCCTATACGCAGAGCCACATCGCCTTCTTTATGGGCATCACCGTGGTCAGCTGCATCTTCTGCCTCATGCATCTGCGCGCCGCGGCGCTGTCATTGATGGTGCTGGTGAATGTGCCCTTCGTGCTGTTCTTCAGCGCCACGGGCAACCCGACCTTCATCGCCACCTCCATCAACGTTGCCCTCGTATCGGTAGCGATGCTGATTATCCTCAACATCTCCTATCGCGACTTCACGCACCTCATCGCCTCACGCAAGGCGCTGCTGCAAAAGCAGGGCGAACTCGAGCAGAAGCAGGTCGAGACCCAGGCGCTCAGCGACGAGAATTTCCGTCTCGCCAATCTCGATGCGCTGACCGACCTGCCCAACCGCCGGAGCTTCTTCTTCAATCTCGAGCAGAGCTTTGCGAAGGCGCGCGAGACCGATACCCCGCTGGTGCTAGGCATTCTGGACCTCGACGGCTTCAAGCCCGTCAACGACGCTTATGGCCATGGCGTGGGCGATCTAGTGCTGGTGGAAGTCGCGCAGCGCCTGCGCGATGTCTGCGGCTCCGACATCACCCCCTACCGGCTGGCCGGCGACGAATTCGCCCTGATGGTGGGCACACATCTCACCGAGGATGTCATTCTC
PROTEIN sequence
Length: 390
MSAAVTDFRNHIAQNPPYRAQTVIIGQQDRCFAQGRIEFGNVFSAAIHWSDRTRTVRAEMGALMLDVVRSWFSVPRDNPELLRAQYAAFSKQVPLLYTILVINTWGLATTHIGLAPDWLAILLPTALTLVCIIRCISWWRSRSYVPSSGEAYQALTRTNRLTAILGVMFVAWSLSLYSYGNAYTQSHIAFFMGITVVSCIFCLMHLRAAALSLMVLVNVPFVLFFSATGNPTFIATSINVALVSVAMLIILNISYRDFTHLIASRKALLQKQGELEQKQVETQALSDENFRLANLDALTDLPNRRSFFFNLEQSFAKARETDTPLVLGILDLDGFKPVNDAYGHGVGDLVLVEVAQRLRDVCGSDITPYRLAGDEFALMVGTHLTEDVIL