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scnpilot_p_inoc_scaffold_6742_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1137..2318)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbL n=1 Tax=Rhizobium giardinii RepID=UPI00037E2AB9 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 393.0
  • Bit_score: 743
  • Evalue 1.00e-211
  • rbh
Conjugal transfer protein L {ECO:0000313|EMBL:CDN95706.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 393.0
  • Bit_score: 740
  • Evalue 1.60e-210
trbL; conjugal transfer protein TrbL similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 391.0
  • Bit_score: 651
  • Evalue 1.20e-184
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGGTGAGGGCACGGATCGAGTTGATCTTTTTCGCAACCGGACTTGCCTGCCTTATGCTGGCCGGCCCTGCGTTTGCACAGCAGGGCCAAGTCCTCACAGAGCTTGAAAATCAGGTTTCTTCCGCTGCCAAGGGTTGGGAAACAACCATCATGGATGCGGCAAGGTCTCTGTTCTGGATCCTCGCCGGAATAGAGGTGGGGATTGCCGCGGTGTGGCTCGCCATTCAGTCGGCATCCCTCGACAGCTGGTTCGCTGAGCTTGTGCGGAGGATCATGTTCATCGGCTTTTTTGCCTTTGTTTTGACCCAGGGACCGACGTTTGCCAAAGCTGTTGTCGATAGTCTCTATCAGATCGGGGCCGGCAGCGGGTCAGCTTCGCCTGCGGAGGTGTTCGATGCGGGTATCCGTGTCGCTTCGCAGATGTCGGAACAGGCCAAGTTCGGTGTCTTCGAGGATAATGCCCTTGCGATCGCAGCCGTTCTCGCCATGGGTATTGTTGTCATCTGCTTCTCGCTGGTGGCAGCGATTTTCGTGGCTGTGATGGTCGAGATGTATGTCGGCCTACTCGCGGGAATGATCATGCTCGGCCTTGGTGGATCCTCGTTCACCAAGGACTTTGCTGTCCGATATCTCGTTTATGCTTTCGGCGTTGGCATGAAGCTCATGGCGTTGGTCATGATCGCTAAGATCGGCTCCGGTGTCCTCTTAGGGCTGGCTCAGGCCCCTACCGCCGAGACCGACCAGTTCATCACGACACTTGCGATCGCCGGCATCTCGGTCGTTGTGTTTATCATCGCGATGTATGTTCCAAACATCATGCAGGGCGTCGTTCAGGGGGCGTCTGTTTCCGGCGGGATGGAAGCCATTCAGCACGGTGGGCAGGCGGCGTCTTTTGCAACCGGCGGAGCCTTCCTGGCCGCAGGTGCGGCCGGAGCAGGATTTGCAGCAGGGCAAGCGGCGCGGGCCGCCGGATCATCCTTTGGAGGAGCGGCTATTCGCGGAGTGGGTGCAGGCCTTGGCTCGGCCGGGCAAGCAGCAGGATCCGCAGCCAAGGAGAAGGCGATCGGGTCGCCCGGCGCTTATGCCGGCTCCATCCTTGGCCTAGCGAACGCGAAGCTCGACCAGGCTCGTGGCAAAGGAGCCTCGCCCGGTCAGCCGCCGGAACGACACGACAAATCGTAA
PROTEIN sequence
Length: 394
MVRARIELIFFATGLACLMLAGPAFAQQGQVLTELENQVSSAAKGWETTIMDAARSLFWILAGIEVGIAAVWLAIQSASLDSWFAELVRRIMFIGFFAFVLTQGPTFAKAVVDSLYQIGAGSGSASPAEVFDAGIRVASQMSEQAKFGVFEDNALAIAAVLAMGIVVICFSLVAAIFVAVMVEMYVGLLAGMIMLGLGGSSFTKDFAVRYLVYAFGVGMKLMALVMIAKIGSGVLLGLAQAPTAETDQFITTLAIAGISVVVFIIAMYVPNIMQGVVQGASVSGGMEAIQHGGQAASFATGGAFLAAGAAGAGFAAGQAARAAGSSFGGAAIRGVGAGLGSAGQAAGSAAKEKAIGSPGAYAGSILGLANAKLDQARGKGASPGQPPERHDKS*