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scnpilot_p_inoc_scaffold_7091_5

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(5169..5591)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 140.0
  • Bit_score: 251
  • Evalue 8.10e-64
twitching motility protein PilT n=1 Tax=Rhizobium giardinii RepID=UPI0003816DA9 similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 140.0
  • Bit_score: 257
  • Evalue 6.20e-66
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 140.0
  • Bit_score: 236
  • Evalue 4.20e-60

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
TTGACCTACCTGCTCGATACCAATGTCGTCTCCGAACTGCGCAAGATCGGCGACGGCAAGGCCGACGCAAATGTCATGGCCTGGCTAGATCGAGAAGATTCAACATTCTTCTTCCTCTCGGCGATCACCATTCTTGAATTGGAGCGCGGCATCCTTGGTGTGCAGCGGCGCGATGCCCACCAAGGCGCCCGGTTGCGGGCCTGGTTGGACAGCCATGTCCGGCCTGAATTCGCTGGCAGAATAATTGCCATCGACGATGCAGTCGCGACGCGCTGCGCCCATCTGCATATTCCCGACCGGCGCAACGAAGCCGATGCTTTGATTGCGGCGACAGCCCTCGTTCATGGGCTCACAGTGGTTACCCGCAACATCAAAGACTTCGAGGGGACCGGCGCGATCATCGTCGACCCTTGGCTGGGATGA
PROTEIN sequence
Length: 141
LTYLLDTNVVSELRKIGDGKADANVMAWLDREDSTFFFLSAITILELERGILGVQRRDAHQGARLRAWLDSHVRPEFAGRIIAIDDAVATRCAHLHIPDRRNEADALIAATALVHGLTVVTRNIKDFEGTGAIIVDPWLG*