ggKbase home page

scnpilot_p_inoc_scaffold_7556_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(5359..5691)

Top 3 Functional Annotations

Value Algorithm Source
putative periplasmic protease; K04774 serine protease SohB [EC:3.4.21.-] id=12493565 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 111.0
  • Bit_score: 215
  • Evalue 2.10e-53
periplasmic protease similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 1.20e-38
Serine protease SohB {ECO:0000313|EMBL:AAZ98582.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus deni similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 109.0
  • Bit_score: 165
  • Evalue 6.00e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
GTGTTCGGCGAAAACACCGAAGCCGGCCGCGCCAAGCTGCGCGAGGAACTGGAGACCATCCACACACACTTCCGCGATTTCGTGCAGGCGCGCCGCGCCCGGCTCGACATCGACAAAGTCGGCACCGGCGAGGCCTGGCTCGGCAGCCAGGCGCTGGAACTGGGGCTGGTCGACGAACTCGCCACCAGCGACGACATCATCCGTGCCGCCTGCGCGCGCGGACGCGTGCTGCACATCCGCTACCGGCGCAAGCTCACGCTGTCCGAGCGGATGCGGGTGTCGGCGCAGGCGGCCTGGGACGGAATCTGGCAGCCGCCGGGGCCGCTGGGGTGA
PROTEIN sequence
Length: 111
VFGENTEAGRAKLREELETIHTHFRDFVQARRARLDIDKVGTGEAWLGSQALELGLVDELATSDDIIRAACARGRVLHIRYRRKLTLSERMRVSAQAAWDGIWQPPGPLG*