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scnpilot_p_inoc_scaffold_8970_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1113..2084)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer ATPase TrbB n=1 Tax=Pseudomonas aeruginosa BL07 RepID=U8LNS1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 309.0
  • Bit_score: 445
  • Evalue 3.70e-122
Conjugal transfer protein TrbB {ECO:0000313|EMBL:ETM67768.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 309.0
  • Bit_score: 444
  • Evalue 1.20e-121
trbB; P-type conjugative transfer ATPase TrbB similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 306.0
  • Bit_score: 443
  • Evalue 6.80e-122

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGAACGTCGCTGTCTCGCGCACGCCCGCCCGAATCGTCAGCGACCGCCAGATTCGCATGCTGCGTAGCGCTATGGGGCCGGCGATCATCCGCGCGCTGGACGATCCCGATGTGGTGGAAGTCCTGCTCAATCCTGATGGACGCCTCTGGATCGACCGCCTCCGCTCCGGCCGTGAGCCGACCGGCGCCTCCCTCTCCGTCGAGGACGCGGCCCGCATCATCAAGGTCGTTGCCAACCATGTCGGCCTCGAGGTCGACCGCGACCATCCGATCCTCTCGGCCGAGTTGCCGGAAACTGGCGAGCGCTTCGAGGGCGTCTTGCCGCCGATCACCTTCGCGCCGACCTTCGCCATCCGCAAGCGTGCGGCCGGCGTGATCCCGCTCGCCCGTTATGTCGGCGACGGCATCCTGACGACAGAGCAGGCCGCGTTCCTGAAAGCCTCCGTCCTCGACCGTCGCAACATCATCATCGCCGGTGGCACGTCGACGGGAAAGACGACGATGGCCAATGCGCTCTTGCAGGAGATCGCCGCGACCGGCGATCGCGTGCTCGTGCTCGAAGACACGATCGAGCTGCAATGCGCGGCCGACGACCATGTGGCGCTACGCACCAAGGCCAACACCGTCTCGACCGCCGACCTCGTGCGCTCGACGCTGCGCCTGCGGCCGGATCGCATCATCGTCGGCGAGGTGCGCGGCGCCGAGGCGCTGGATCTCCTCAAGGCGTGGGGAACCGGCCATCCAGGCGGCCTCGCCACCCTTCATGCCGGCTCGGCGCTCGGCGCGCTCATCCGTCTGGAGCAGCTTATTCAGGAAGTCGTCGTCACCGTGCCGCGCGCGCTGATCGCCGAGGCTGTCGACGTCGTCGTCTTCATCGCCGGGCGCGGCCGCAAACGCCGCGTCGAGGACATCATCCGCGTCACGGGCCTCGACGGCGATGCCTACGCGATCGAGCACGTCACCGGAGAATAG
PROTEIN sequence
Length: 324
MNVAVSRTPARIVSDRQIRMLRSAMGPAIIRALDDPDVVEVLLNPDGRLWIDRLRSGREPTGASLSVEDAARIIKVVANHVGLEVDRDHPILSAELPETGERFEGVLPPITFAPTFAIRKRAAGVIPLARYVGDGILTTEQAAFLKASVLDRRNIIIAGGTSTGKTTMANALLQEIAATGDRVLVLEDTIELQCAADDHVALRTKANTVSTADLVRSTLRLRPDRIIVGEVRGAEALDLLKAWGTGHPGGLATLHAGSALGALIRLEQLIQEVVVTVPRALIAEAVDVVVFIAGRGRKRRVEDIIRVTGLDGDAYAIEHVTGE*