ggKbase home page

scnpilot_p_inoc_scaffold_9669_6

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3142..4746)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000303C8D3 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 529.0
  • Bit_score: 492
  • Evalue 4.40e-136
  • rbh
Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase {ECO:0000313|EMBL:CAM75773.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 530.0
  • Bit_score: 487
  • Evalue 2.60e-134
superfamily II DNA/RNA helicase similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 530.0
  • Bit_score: 483
  • Evalue 7.50e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGAAGCCTGTACTGCGCCCCTACCAACGTGCGGCAATTGACGCGCTGTACCAGTATTTTCACACCAAGGCAGGTAATCCTGTTCTGGTGTTGCCTACCGGCGCCGGGAAGTCGCTGACGATGGCGGCATTCATTCAAGAGGCCATCGAACAATACCCGGCAACCCGGATTCTGCTGCTGACGCATGTGCGCGAACTCATCCAGCAAGACGCCCAAGCCATCATCGGGTACTGGCCGGAAGCGCCCATCGGCATCTGGTCGGCAGGCCTTGGCAAGAAGGTCAAGCACCAGATCACCGTGGCCGGCATCCAGTCCATCCACAAGATGCCCGCCAAATTCGGCGGCACTGATCTGGTCATCATCGACGAGGCCCACTTGCTGTCGAAGAACAGCGACACCATGTACGGGCGCTTTCTCGCTGGCCTGCGCCAGCACAACCCGCATCTCAAGGTCATCGGACTGACGGCCACGCCGTACCGCATGGATTCTGGCATCCTGATCGAAGGCGAGCACCGGGTATTCACCGACATTGCCTACGAGGCTGGTGTTGGCGATCTCATCAAAGACGGCTGGCTCTGCCCGCTGGTCGCCCGCAACGGCGCCACCAAGGCCGATCTGTCCGACGTGCATACCCGAGGCGGGGAGTTCGTGGCCAACGAGTTGCAGCAGGCCATGGACAAGGAATACTTGATTCAGGGCGCCCTGGATGAAGTGGGACGCTACGCCCACGACCGCAACCACATCCTTGGCTTCTGCGCTGGCGTGGAGCACGCCGCCCACTGCGCCGAGGCCAGCCGTGCCCGTGGCTGGACAGCCGACTACGTGACCGGCGACATGGCCCCCGGCGAACGTGACGCCAAGATCAACGCCTTCAAGGAAGGGCGCATGCGCATCTTGTTCAACGCCATGCTGCTCACTACGGGATTCGATGCCCCGCACATCGACTGCATCGTGATGCTGCGCCCGACAAAATCCACCGGCCTGTACGTGCAGATCATGGGGCGCGGCCTGCGCAAGCACCCGAGCAAGGAGAACACCTTGATTCTGGACTTCGCAGGCAACGTCGAGCGCCATGGCCCAATCGACCAGATCAAGGTCAAACGCAAGGCAGAGAAAGGCGAAGGCGTCAGCGTGGCGCCGGTCAAGGAATGCCCGAACTGTCAGGCGCTGGTGCATGCTGGTGTGCGCGAGTGCCCGGAGTGCGGCAACCTGTTCCCTGAGAACGAGGAAGCCAAACACGGCACCGAAGCCGCCGATGCCGTGGTGGTTGCCGCGCTAGAAAAGCCACGCACCTACACCGTGGATCGTGTCGAGTACGAGCGGTACTCGAAGATCGGCAAGGCCGATTCGGTCAAGGTGACGTACTGGTGCGGCCCCTCCACCTTCAACGAGTGGCTGCCGATCCTCGATGAGCGCAGCTATGTGAAGAAACACTACATCGCCTGGTGCTGGCATCGCGGGATTGTTGCCGCCCAGACGATTGAGGAATTCTTGACACAAGTCGAAGAACAGCGAATCCCTCAACCCGAAACCATCACCGTGAAACTTAACGGGAAATATTGGCAGGTCATGGATGCCAAGTTCAACTGGAGGAAAACCGCATGA
PROTEIN sequence
Length: 535
MKPVLRPYQRAAIDALYQYFHTKAGNPVLVLPTGAGKSLTMAAFIQEAIEQYPATRILLLTHVRELIQQDAQAIIGYWPEAPIGIWSAGLGKKVKHQITVAGIQSIHKMPAKFGGTDLVIIDEAHLLSKNSDTMYGRFLAGLRQHNPHLKVIGLTATPYRMDSGILIEGEHRVFTDIAYEAGVGDLIKDGWLCPLVARNGATKADLSDVHTRGGEFVANELQQAMDKEYLIQGALDEVGRYAHDRNHILGFCAGVEHAAHCAEASRARGWTADYVTGDMAPGERDAKINAFKEGRMRILFNAMLLTTGFDAPHIDCIVMLRPTKSTGLYVQIMGRGLRKHPSKENTLILDFAGNVERHGPIDQIKVKRKAEKGEGVSVAPVKECPNCQALVHAGVRECPECGNLFPENEEAKHGTEAADAVVVAALEKPRTYTVDRVEYERYSKIGKADSVKVTYWCGPSTFNEWLPILDERSYVKKHYIAWCWHRGIVAAQTIEEFLTQVEEQRIPQPETITVKLNGKYWQVMDAKFNWRKTA*