ggKbase home page

scnpilot_p_inoc_scaffold_11318_8

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 3289..4287

Top 3 Functional Annotations

Value Algorithm Source
Putative bacteriophage baseplate assembly protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U610_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 282.0
  • Bit_score: 411
  • Evalue 7.90e-112
  • rbh
Putative bacteriophage baseplate assembly protein {ECO:0000313|EMBL:EGP57880.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 282.0
  • Bit_score: 411
  • Evalue 1.10e-111
phage baseplate J-like protein (W) similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 267.0
  • Bit_score: 193
  • Evalue 7.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGGTTGATCCCGTCAAGCGCGCGATCGAGGAACTGCGCGCGGCCGGCGCGCCGTCGTTCTTCGAACGCGATCCCCGCGTCTGGAAAGCGGTGCTGAAGGCGCGCTTCGAAGAGGCCTCCGGCCGCACGCTTTATCCGGCGCAAACCGAGATGTTCCTGATCGAGACCGCATCCTATGCGCTTTCGCTGCTCGGCGAGGCAGCGCAGATGGGTGTCGAGCAGAACACCATCGTCTTTGCGGAAGGCGTCCACCTCGAAAACCGTGCCGCGAACGTTTCGACGTTCCGCCTCCTGGCCCAGCCTGCGAAAACGACGATCGAATTCCGCCTATCGACCGTGCGGCTGCTCGACACCGTCATCCGAAAAGGCACCCGGGTCGCCGCCGGCAATGTCGTCACCTTTGCCACCGATGTCGATCTTGTCATTCCGGCCGGCATGCTCGCGGCTTCCGTTCCGGCCACGGCCGAGGTGCCAGGCGGGATTTGGAACGGCCTCGGTATCGGCAAAGTCACCGACATCCTCGATCCCGTCGCCTTTGTTACATCAGCGGCGAACATCGCCGATATCTCAGGCGGCACGGATATCGAGGATATCGAACGTTTCCGCCTGCGCTCCGCCAATGCACTGTTCAAGATCGCCAAGACCGGGCCGGCCAAGGGCTACCGCGAACATGTCATGGACGTCAGCCCCGACATTGTTTCGGTCGCCGTCATCCGACCGGAACCAGGCGTCATCCACATCTATCCGCTGCTGAAGACCGGCCTGCCATTGCCCGAGCTGAAGGCGCAAATTCTTGCGCATCTCGATCCCGAACTACTTCGGCCGATGGGCGATGACGTGTACGTGCTCGAGGTTTCGACCTTCGTCATCCCCGACACGGCGGCACCGGACCTGCCGAAGTCGAATGATTTCACCACGGGAAACACGGAGGGCAGAGCCAGTGTGAAACTCGCGGTGAAGTTGTCGGACTTCTCTCCGTTGACGCCATTCCCATTTTGA
PROTEIN sequence
Length: 333
MVDPVKRAIEELRAAGAPSFFERDPRVWKAVLKARFEEASGRTLYPAQTEMFLIETASYALSLLGEAAQMGVEQNTIVFAEGVHLENRAANVSTFRLLAQPAKTTIEFRLSTVRLLDTVIRKGTRVAAGNVVTFATDVDLVIPAGMLAASVPATAEVPGGIWNGLGIGKVTDILDPVAFVTSAANIADISGGTDIEDIERFRLRSANALFKIAKTGPAKGYREHVMDVSPDIVSVAVIRPEPGVIHIYPLLKTGLPLPELKAQILAHLDPELLRPMGDDVYVLEVSTFVIPDTAAPDLPKSNDFTTGNTEGRASVKLAVKLSDFSPLTPFPF*