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scnpilot_p_inoc_scaffold_11330_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(492..1208)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Amycolatopsis alba RepID=UPI00036CEB89 similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 227.0
  • Bit_score: 143
  • Evalue 2.90e-31
GntR family transcriptional regulator {ECO:0000313|EMBL:KDN16653.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifam similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 226.0
  • Bit_score: 143
  • Evalue 3.10e-31
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 226.0
  • Bit_score: 139
  • Evalue 1.50e-30

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGTCCAGCTATGAGCCACTGGGTAGGCAAACGCGATCCACGCAAGTTGCGCAACAGCTGCGGCGCGCGATTGATGCAGGCCAATACCAGGTCGAGGAGAGACTGCCGAGCGAGCGCCTCATGTGTGTGCAGCTCGGCGTTTCGCGCATGGTGTTGCGCGAATCACTGCGCGAACTGGTGAACGCGGGCTATATCGATGTACGCCATGGCAGTGGAACGTATGTGCGTTCGCGTACCGAGATGCAGGATCAGGCGCTCACCCACTGGCTGTCCAGCCATCACAACCATGTCGTCAATCTGTTGGAGATGCGTTCGCTGTTGGAGCCGGGGATTGCTGAATTGGCCGCGAAGCGGGCCGAGCCGCTAGGCATCCAAGCCTTGCAGCAAACGATCGATCTCATGCGGGAAAGCATCGACATCGAAGAAATCATCAAAGCCGACGAGATGTTCCACAGCACGTTGGCCAAATTGACCTGCAATTCGGTAGTAGTCCAATTGATCGACCACACCATGCAAGCCATGGGGGGCGAGCGCGAAGTGACATTGGCGAGCCCTGAAGGCGTCATTGTTGCCGCAGATGGACACCAGAAGGTGCTCGATGCGATCCGTGCTGGTAACGCGATCGCTGCCTCCGAAGCCATGCGCCACCACTTGGAGGAAGCGCGCAATTACGCGATGCGTGATAGCGCGACAGATCCAAATCGACGCGATTCCTAA
PROTEIN sequence
Length: 239
MSSYEPLGRQTRSTQVAQQLRRAIDAGQYQVEERLPSERLMCVQLGVSRMVLRESLRELVNAGYIDVRHGSGTYVRSRTEMQDQALTHWLSSHHNHVVNLLEMRSLLEPGIAELAAKRAEPLGIQALQQTIDLMRESIDIEEIIKADEMFHSTLAKLTCNSVVVQLIDHTMQAMGGEREVTLASPEGVIVAADGHQKVLDAIRAGNAIAASEAMRHHLEEARNYAMRDSATDPNRRDS*