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scnpilot_p_inoc_scaffold_12746_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..784

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1502851 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 243.0
  • Bit_score: 409
  • Evalue 3.30e-111
rnr; 3'-to-5' exoribonuclease RNase R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 238.0
  • Bit_score: 322
  • Evalue 8.20e-86
Ribonuclease R n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WRY6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 255.0
  • Bit_score: 332
  • Evalue 2.80e-88

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATCGACATCAAGCTGCCCAAGGACGCCGCGCTGCGGCCGGTGCTGTTCAACCGCATCCTCAAGATGATCAAGGGCTCGGAGAACGAGCTCTTCATCAACGAGGTCGTGCTGCGCACCCAGGCCCAGGCCGAATATGTCGCCGAGAATTACGGGCATTTCGGCCTCAACCTGCGCCGTTACGCCCATTTCACCTCGCCGATCCGGCGCTATGCCGACCTCGTCGTCCATCGCGCCCTGATCGCGACGATGAAGCGCGGCGATGACGGGCTGCCCAAGGCGACGACGCTCGCCGAATTGCGCGAGGTCGCGACCCGGATCTCGGCGGCCGAGCGCCGCGCCATGGCGGCCGAGCGCGAAACCACCGACCGGCTGATCGCGCATTTCCTCGCCGACCAGATCGGCGCGAGCTTCGATGGCCGCATCGCCGGGCTCAATCGCGCCGGGCTCTTCGTCAAGCTCGACGGCACCGGGGCCGACGGCTTCGTGCCGGCCTCGACGCTCGGCGCGGATTATTACCGCCATGACGAAGCCGCCCATGCGCTGATCGGCGAGCGCAGCGGTGAAAGCTGGCGTCTCGGCGACCGTGTCCATGTCCGTCTGGTCGAGGCGGCCCCCGTCGCGGGCGCCCTGCGCTTCGAACTCCTGAGCGAAGGGCGGACTGTGACATCGAACCGCTCTTTCAAAAAAGCCGCGCGTCCCCTAGCTGCAAGGCGCAGTATGGCCCGATCTGCGGCGAGGAACTGCATCACCAGCGTGCCGACGATCTGCCGCCCTATATCGTGA
PROTEIN sequence
Length: 261
IDIKLPKDAALRPVLFNRILKMIKGSENELFINEVVLRTQAQAEYVAENYGHFGLNLRRYAHFTSPIRRYADLVVHRALIATMKRGDDGLPKATTLAELREVATRISAAERRAMAAERETTDRLIAHFLADQIGASFDGRIAGLNRAGLFVKLDGTGADGFVPASTLGADYYRHDEAAHALIGERSGESWRLGDRVHVRLVEAAPVAGALRFELLSEGRTVTSNRSFKKAARPLAARRSMARSAARNCITSVPTICRPIS*