ggKbase home page

scnpilot_p_inoc_scaffold_12756_4

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(3150..3902)

Top 3 Functional Annotations

Value Algorithm Source
XRE-family transcriptional regulator n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JWC4_STRHJ similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 234.0
  • Bit_score: 321
  • Evalue 6.20e-85
  • rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KDN72930.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 234.0
  • Bit_score: 322
  • Evalue 6.70e-85
XRE-family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 234.0
  • Bit_score: 321
  • Evalue 1.80e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces olindensis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGCTCGCCGGTCTGTGCGTGGAGTACTACACGCGAATGGAGCGGGGGAAGATCGGCGGCGCGTCCGAGAGCGTTCTCGATGCGATCGCCCGCGTGCTCCAGCTCGATGACGACGAGCGTGCGCACTTGAACGACCTCGCCCGCAACGTCCTTCCTCGTCCCCGGCGTCCGCGAGCGCAGCCCGTGACCGCGATCACCGCGTCCGTCCAGCAGGTTCTGGACTCGATGAGCGTTCCCGCCGTCATCCAGAACGCGCGATTGGACATCCTCGCAGCGAATGCGCTGGGCCGGGCGCTCTACAGCGTGCTGTTCGACGGCGCATCCTCGACGCCGAACTTCGCACGATTCGCTTTCCTGGACTCGCGCGCATCCACGTTCTACCCGGACATCGACGACGCACGAGATCTCGTCGTCGGCGTGCTGCGAGCGACGGTCGGGCGTGACCCTCTGGACCGGACGACGACCGAACTGGTCGGTGAGCTCTCGACCCGCAGCGCCGACTTCGCGTTTCGCTGGGCGAAGCACGACGTGCGCCGGCACACGCGTGGACGCAAGCTGATTCATCACCCGCAGATCGGCCAGTTGGACCTGACCTTCGATGACTTCGTGCTGCCGGTGAACGGCGACCTGTCCATCACCACCTATACGGCGCTTGAGGGCAGCCCCAGCGCCGACGGCATCCGACTGCTCGTCGCGCAGGCCGCGCTCGATAGTGACGCTCCCTCGCTCATCCTCGAGAGGACGACGCAGTAA
PROTEIN sequence
Length: 251
MLAGLCVEYYTRMERGKIGGASESVLDAIARVLQLDDDERAHLNDLARNVLPRPRRPRAQPVTAITASVQQVLDSMSVPAVIQNARLDILAANALGRALYSVLFDGASSTPNFARFAFLDSRASTFYPDIDDARDLVVGVLRATVGRDPLDRTTTELVGELSTRSADFAFRWAKHDVRRHTRGRKLIHHPQIGQLDLTFDDFVLPVNGDLSITTYTALEGSPSADGIRLLVAQAALDSDAPSLILERTTQ*