ggKbase home page

scnpilot_p_inoc_scaffold_12767_3

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2887..3933

Top 3 Functional Annotations

Value Algorithm Source
Clathrin heavy chain n=1 Tax=Ciona intestinalis RepID=F7AMF6_CIOIN similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 357.0
  • Bit_score: 270
  • Evalue 1.80e-69
Clathrin heavy chain {ECO:0000256|PIRNR:PIRNR002290}; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona intestinalis similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 357.0
  • Bit_score: 270
  • Evalue 3.20e-69
similar to Clathrin, heavy polypeptide (Hc); K04646 clathrin heavy chain similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 358.0
  • Bit_score: 269
  • Evalue 1.20e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ciona intestinalis → Ciona → Enterogona → Ascidiacea → Chordata → Metazoa

Sequences

DNA sequence
Length: 1047
GTGCAGCTCTCGGACAAGAACATCGATGCCTCTCTGATCAAGTTCGCGAATGTGACGATCTCCGCCGAGAACTACGTTTGCGTGCGTGAGGAGGCGCAGAAGACGATCGCCATTGTGGACCTCAAGTCCAAGTCGTCTCCCACGCGCCTTCCTATCGCTGCTGACTCGGCGATCATGAACCCCGTGTCCAAGGTCGTTGCTCTCCGCGCTGGTGGCCACCTCACCATGTACTCGCTCGAGATGAAGGCCAAGATGTCCCAGGCCACCATCGCCGGTACCATCGTGTACTGGAAGTGGATCGACCCTAAGACTGTCGCCATTGTCACCACCGACTCCGTCTTCCACTGGTCCCTCGAGGGCGCCGGTGAGCCCGTCAAGATGTTCGACCGCACCCCGCACGACTCGCCCGTCCAGGTCATTAACTACTTTGCCACCCCCGATGGCAAGTGGCTCATGCTCTCTGGCCTCTCGGTCGACGCCAACAAGAACTTCAACGGTGTTCTCCAGGTCTACTCCGTCGATGCGCGCGCCTCGCAGCCCACGCTCAACGCCCCCGCCGCGACTTTCGCGCACACCCAGCTCGACAACAAGGAGGCTAAGTCCAACATCTTCGCCTTCTGCCGCAAGGACCCCGCCACGGGCACCTACACCCTCCAGATGCTCGAGCTTGGCGTCCCCAAGGAGACTGCCTTCTCCAAGCAGGCCCCCATGCGCTTCGCCGACGCCGCCGACTTCCCCATGAACATGGTTGCTGACCCCAAGTACGGCATCCTCTACGTCATGTCGCAGCAGGGCTTCGTCTTTGCCTACGAGATCCAGTCCGGCAAGCCCATTTTCGCGAGCCGCGCGTCGCAGGTGACTCTGTTCGCCGTGGCGCCCCACTCCGAGGACGGTTGCGTCGCCATCGATCTCAAGGGCCGCGTCGTCCACTTCGCTCTCGACAAGGCCAACGCCGTGCCGTACATCTGCAACACGATGCGTGACCTCGACCTCGGCGTCCAGCTCGCGCGCCGCTACAACCTCGACGGCGCCGACCACCTGTTCAAG
PROTEIN sequence
Length: 349
VQLSDKNIDASLIKFANVTISAENYVCVREEAQKTIAIVDLKSKSSPTRLPIAADSAIMNPVSKVVALRAGGHLTMYSLEMKAKMSQATIAGTIVYWKWIDPKTVAIVTTDSVFHWSLEGAGEPVKMFDRTPHDSPVQVINYFATPDGKWLMLSGLSVDANKNFNGVLQVYSVDARASQPTLNAPAATFAHTQLDNKEAKSNIFAFCRKDPATGTYTLQMLELGVPKETAFSKQAPMRFADAADFPMNMVADPKYGILYVMSQQGFVFAYEIQSGKPIFASRASQVTLFAVAPHSEDGCVAIDLKGRVVHFALDKANAVPYICNTMRDLDLGVQLARRYNLDGADHLFK