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scnpilot_p_inoc_scaffold_12398_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: 2..151

Top 3 Functional Annotations

Value Algorithm Source
transcription antitermination protein NusB n=1 Tax=Pannonibacter phragmitetus RepID=UPI000373FB17 similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 48.0
  • Bit_score: 68
  • Evalue 2.50e-09
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1502724 species="Bacteria; Prot similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 44.0
  • Bit_score: 76
  • Evalue 1.30e-11
transcription antitermination factor NusB similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 49.0
  • Bit_score: 66
  • Evalue 3.40e-09

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 150
TTCGAACTGCTGCGCCGCCGCGACATCCCGCCGGGCGTGGTGATCACCGAATATGTCGATATTGCCAAGGCGTTCTACGAGGACGACGCGCCCGGCATGGTGCACGCCGTGCTCGATACCATCGCCCGGCAGTTGACCGCCGCCGGCTGA
PROTEIN sequence
Length: 50
FELLRRRDIPPGVVITEYVDIAKAFYEDDAPGMVHAVLDTIARQLTAAG*