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scnpilot_p_inoc_scaffold_11872_1

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1..360)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C n=1 Tax=Ochrobactrum anthropi RepID=UPI000287B9FE similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 115.0
  • Bit_score: 181
  • Evalue 3.70e-43
Transcriptional regulator DeoR family {ECO:0000313|EMBL:EYR78665.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. D similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 115.0
  • Bit_score: 218
  • Evalue 6.50e-54
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 124.0
  • Bit_score: 177
  • Evalue 2.60e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCAGGGCCTCCGGTGAACAAGAAAGTCGACGTCAAGGATTTACTTTCGGAAGAGCTGCCGAGCGACAGCCGGCATGCACGCCAGCTCGTGCGCCGCCAGATGATTGCCGAGACGGTCATCGCCGAAGGCTCCATCCGCATCGAGGATCTCACCGAACGCTTCGGCATCAGCCTGATGACGGCGCATCGCGACGTCGATGAACTCGTCAGCCGCGGCCTTTTCCGCAAGACGCGCGGTATCGTCTCCGCCGCGCCCACCAGCCTGATCGAATCCTCCGACGTCTACCGCGCGACGAAGCAGGCGAAGGAAAAGAAGGCGATCGCCAGGGCGGCGATGCGCTTCGTGGAGCCGGGTCAG
PROTEIN sequence
Length: 120
MAGPPVNKKVDVKDLLSEELPSDSRHARQLVRRQMIAETVIAEGSIRIEDLTERFGISLMTAHRDVDELVSRGLFRKTRGIVSAAPTSLIESSDVYRATKQAKEKKAIARAAMRFVEPGQ