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scnpilot_p_inoc_scaffold_11872_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(450..1397)

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YNI8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 315.0
  • Bit_score: 560
  • Evalue 1.00e-156
  • rbh
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:EYR78664.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sh similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 315.0
  • Bit_score: 613
  • Evalue 2.40e-172
Periplasmic binding protein/LacI transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 315.0
  • Bit_score: 559
  • Evalue 4.80e-157
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGTTCAAAAAAGGAATGCGTGTACTTTTCGCGGCGACTGCCGCGCTGCCGCTGCTGTTCAGCACCGCCTGGGCTGAAGGCCTGATGACGATCATCGTCAACGATCCGTCCAACCCCTACTGGTTCACGGAAGGCGAAGTCGCCAAGAAGACGGCTGAAAGCCTTGGCTACACGGCCAATGTCGGCGCGCACAAGGGCGACACCAACACCGAAAGCAACCTGATCGACACGGCCATCACCAACAAGTCGGTCGCCATCATCCTCGATCCGGCGAATGCGGACGGTTCGGTCGGTGCGGTCAAGAAGGCGGTTGCCGCCGGCATCCCGGTCATTCTCGTCAACGCCGAGATCAACCAGGAAGGTCTCGCCAAGGCGCAGCTCGTTTCGAACAATGCTCAGGGCGCCGCGCTTGGTGCACAGCAGTGGGTCGAAGCGGTCGGTGACAAGGGAAAATATGTCGAGCTTTTCGGTGCGCCGTCCGACAACAACGCCGCAACGCGCTCGAACGGTTACGAGACTGTCCTGACGCAGTATCCGGACCTCGAAAAGTCCGGCAAGGAAGTCGCCGACTGGGATCGCACCAAGGGACACGCCAAGATGCAGTCGCTGCTTCAGGCTAATCCCGACATCATCGGCGTGATCAGCGGTAATGACGAAATGGCCCTCGGCGCCATCGCGGCGCTCAAGGAAGCCGGCAAGCTGGAACAGGTGAAGGTCGGCGGCTTCGACGGTTCACCGGATGCCGTTGCTGCCATCAAGGCGGGCGAGCTGCAGTACACCGTCCTCCAGCCGGTTGCCGTCTTCTCGGAAGCGGCCGTCAAGCAGGCCGATAACGTGATCAAGACCGGCTCCACCGGTGTCGATACCGAAAAGCAGCTCTTCGATTGCCTGCTGATCACCAAGGACAACGTCGACAAGTACACCGCTCCCTTCGTTCTGAGCGAGTAA
PROTEIN sequence
Length: 316
MFKKGMRVLFAATAALPLLFSTAWAEGLMTIIVNDPSNPYWFTEGEVAKKTAESLGYTANVGAHKGDTNTESNLIDTAITNKSVAIILDPANADGSVGAVKKAVAAGIPVILVNAEINQEGLAKAQLVSNNAQGAALGAQQWVEAVGDKGKYVELFGAPSDNNAATRSNGYETVLTQYPDLEKSGKEVADWDRTKGHAKMQSLLQANPDIIGVISGNDEMALGAIAALKEAGKLEQVKVGGFDGSPDAVAAIKAGELQYTVLQPVAVFSEAAVKQADNVIKTGSTGVDTEKQLFDCLLITKDNVDKYTAPFVLSE*