ggKbase home page

scnpilot_p_inoc_scaffold_14206_10

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(5536..6036)

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZVL9_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 162.0
  • Bit_score: 171
  • Evalue 9.10e-40
Phage integrase {ECO:0000313|EMBL:ENO98368.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 162.0
  • Bit_score: 171
  • Evalue 1.30e-39
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 164.0
  • Bit_score: 167
  • Evalue 2.80e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera phenylacetica → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
AACGTCCGCTCGCACAACGTGCGGCACGCGAGCTGGTCGGAGATCGACCTGAAGACCAAGACCTGGCTCATTCCTGGCGAGGACGCGGAAGGCTCGAAGCAGCGGATGAAGGCCGGTGTCAGCCACCGAGTTCCCCTGTCGCCGGCTGCGCTCAAGCTGCTGGAGAAGGTGGGCAAGACGGCCGGCACGGATCTGATCTTCCCCTCACCTCGAAAGCTCGCGCCGCTGTCGGACATGGCCCTGAGCAAGCTGATGAAGGACATGGAGGCCAACGGGGTGCCGCATGGCTTTCGCTCGACGTTTCGAGACTGGACGGTGGAGCGCACAAGCTTCCCGCGCGAAGTCACCGAGCGGGCCATGGCTCACGCAGTGGGCGACAAGACTGAAGCCGCCTACCTGCGGTCCGACGTGTTCGAGAAGCGCCGCCGCCTCATGGACATGTGGGCGACGTACTGCACGACGAAGCCCCAGAAGGAGGGGAAGGTGATCTTGATCCGCTAA
PROTEIN sequence
Length: 167
NVRSHNVRHASWSEIDLKTKTWLIPGEDAEGSKQRMKAGVSHRVPLSPAALKLLEKVGKTAGTDLIFPSPRKLAPLSDMALSKLMKDMEANGVPHGFRSTFRDWTVERTSFPREVTERAMAHAVGDKTEAAYLRSDVFEKRRRLMDMWATYCTTKPQKEGKVILIR*