ggKbase home page

scnpilot_p_inoc_scaffold_12978_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(851..3223)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000362AD0D similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 697.0
  • Bit_score: 749
  • Evalue 2.90e-213
  • rbh
polysaccharide export protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 793.0
  • Bit_score: 784
  • Evalue 1.50e-223
periplasmic protein involved in polysaccharide export similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 698.0
  • Bit_score: 715
  • Evalue 1.30e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC12_FULL_Burkholderiales_65_23_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2373
ATGAGAAACCAATATCAACGCGGCGCCCTCCTGGGATCGGTCTTGTGGGCCATCAGCCTTGCGGCATCCGGGCAAACCACCGGCACGACTGCCTCGGCTGCAATGGTTGCACCCGTTGTGCCGGCGACGCCTTCCAACATGTCGCCATACGAGTCCCATAGCAGCTTGTCCCTTGACGCGGCTGCCGCTGCCGCTGCCGGCCAGGCAACGTCCATCCTTCCTGTCGCCGCCCCTTTTCCCTCCAATCTTCCCGATGCGTCCCGCCTTGTCCAGGCGCCTGCCGATAAGCCGCAGAGCAATTTCCAGCGTTTCGTGCAACAGGCTACCGGCCGCTCACTGCCAATCTATGGCCAGCAGCTCTTCAGCGCACCTGCCGGCTACGAGCCCGTCACCCAGGCTCCGGTGCCCAATGACTACATCCTTGGGCCGGGTGACGAAGTTCGCCTGCAGGTCTGGGGCAGCATTGACGCTGACAAGACCCTGGTGATCGACCGGCATGGCCAGATCTACCTGCCCAAAGTCGGATCGATCAACCTCACCGGTGCGCGCGCAGGCGATCTGGAGTCCGTGTTGCGCAGCAAAATTGGCCGCATCTTCACCAACTTCAGCCTCAATGCCACGCTGGGCCGCCTGCGCAGCATCCAGATCTACGTCGTTGGCCAGGCGCGTCAACCGGGCACCTATACCGTATCCAGCCTTTCCACCCTGATCAATGCCCTGTTCGAGGTGGGCGGCCCCGGCAACAATGGCTCGATGCGAAACATCCAGTTGAAACGCAACGGCCGCATCGTCGGCAAGATGGACCTCTACGATTTCATCGCCCGCGGCGACCGCAGCGGCGACGTGCCGCTGCAGCCCGGCGACGTCATCGTCATTCCGCCGGTCGGCCCGCGTGTCGCCGTGCTGGGCGCGTTCGAGCAGCCGGCGATCTACGAACTGAAAGGCTCCGGCAGCATCGGCGAAGTGCTGGCGCTGGGGGGCGGACTGTCTGTGCTGGCGAAGCCCGGCAAGGCCTTGCTGGAGCGGATCGATCCGGCCGCCGACAGGCCCCGTCAGGTTGAGGATATTGCGCTCGACAAGGCTGGCCTGCAGCGTTCCCTGCGCGACGGCGACATCCTGACCCTGTTCGAGATCAGCCCGCAGTTCGCCAATGCGGTGACCCTGCGCGGCAACGTGGCCGAGCCGCTGCGTTACCCCTACACCGCCGGCATGCGCGTCCGCGACTTGATCCCCAGCCGCGAGGCGTTGATCGCTCCGGATTACTACCGGCGCAAAAACCTGTTGGTGCAGTTCGAAGACGTCAGCAAGGCCGACATGGAGCGCGAGAGCCAGAGCAAGCCGATCAAGGCGGAAAGCGGCAATCCGGACAAAGTCGACACCGCCGCGGTGGAGTGGGGGGTTCGCAACCTGCTGGACGAGGTCAGTTGGGAGTATGCCGTGATCGAGCGCCTGGACCGCGCTAGCCTCACCACGCAACTGATCCCCTTCAATCTGGGGCGCGCGGTGATCGACGGCGACGATCAGCACAACCTGGCGTTGCAGCCCGGCGACATTGTCACCATTCTGTCCAAGAAAGACCTGCGGGTACCGCAGAACCGCCAGACCCGTCTGGTGCGGGTGGAAGGCGAAGTCGCCGCGCCCGGGATTTATCAGGTGGAGGCCGGCGAAACCCTGCCGCAATTGCTGGCCCGGCTGGGCGGCGTCACCCCCAACGCCTATTTGTACGGGGCTGAGTTCACGCGCGAATCGGTGCGCAGTCAGCAGCAGAAAAACCTCGATACCGTGATCCGCAAACTGGAATCGCAACTGCAGGCCGAGTCGGGCAGGCAATTGGCCAATACCAAGACCGGGGGCGACGCTCAGCTCCAGCTTCTGGCGCAGCAACAACAGCTTGACCGCATGAAAGCCTTCAAGAGCAACGGTCGTGTCAGCCTGGAACTGCCGCCGACCCATGTCGATTTGAGCAAGTTGCCGGCGCTGCCGCTGGAAGACGGCGACGCCATCCATATCCCCAGCCGCCCTGGATTTGTTGCGGCGGTTGGCGAGGTATACAACGAAAATGCCATTATCTATCGCCCCGGCAGAACCGTGGGCGATGTGCTCAGAAGCGCCGGGGTGAGCGAGGACGCCGAACCGGGCAATGCATTCGTGCTGCGAGCCGATGGCAGCGTCAAGTCCGCACGCGACAGCAAAAGCCTGTTTCGCATGAGCAGTTTCGATGACGTCGAGCTCATGCCGGGCGATACCGTGGTCGTGCCGGCCAAGCTGGATCGCCAGAACGGCTGGACCAAGTTTGTGACCGGCCTGAAAGACTGGACGCAGGTCCTCTACCAGATGGGTCTGGGCGCTGCCGCCTGGAAAACCCTGAAATAA
PROTEIN sequence
Length: 791
MRNQYQRGALLGSVLWAISLAASGQTTGTTASAAMVAPVVPATPSNMSPYESHSSLSLDAAAAAAAGQATSILPVAAPFPSNLPDASRLVQAPADKPQSNFQRFVQQATGRSLPIYGQQLFSAPAGYEPVTQAPVPNDYILGPGDEVRLQVWGSIDADKTLVIDRHGQIYLPKVGSINLTGARAGDLESVLRSKIGRIFTNFSLNATLGRLRSIQIYVVGQARQPGTYTVSSLSTLINALFEVGGPGNNGSMRNIQLKRNGRIVGKMDLYDFIARGDRSGDVPLQPGDVIVIPPVGPRVAVLGAFEQPAIYELKGSGSIGEVLALGGGLSVLAKPGKALLERIDPAADRPRQVEDIALDKAGLQRSLRDGDILTLFEISPQFANAVTLRGNVAEPLRYPYTAGMRVRDLIPSREALIAPDYYRRKNLLVQFEDVSKADMERESQSKPIKAESGNPDKVDTAAVEWGVRNLLDEVSWEYAVIERLDRASLTTQLIPFNLGRAVIDGDDQHNLALQPGDIVTILSKKDLRVPQNRQTRLVRVEGEVAAPGIYQVEAGETLPQLLARLGGVTPNAYLYGAEFTRESVRSQQQKNLDTVIRKLESQLQAESGRQLANTKTGGDAQLQLLAQQQQLDRMKAFKSNGRVSLELPPTHVDLSKLPALPLEDGDAIHIPSRPGFVAAVGEVYNENAIIYRPGRTVGDVLRSAGVSEDAEPGNAFVLRADGSVKSARDSKSLFRMSSFDDVELMPGDTVVVPAKLDRQNGWTKFVTGLKDWTQVLYQMGLGAAAWKTLK*