ggKbase home page

scnpilot_p_inoc_scaffold_16681_2

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(1226..1546)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NWR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 106.0
  • Bit_score: 209
  • Evalue 1.50e-51
XRE family transcriptional regulator {ECO:0000313|EMBL:KFE34699.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thiocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 106.0
  • Bit_score: 209
  • Evalue 2.10e-51
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 106.0
  • Bit_score: 205
  • Evalue 7.80e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thioclava sp. 13D2W-2 → Thioclava → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
ATGAAGGCGGAAGAAGAAACACTGAGGCTGATCGGCGACCATTTTCGCCGCGCGCGTCTTGCAGCGGGGTTGACCCAGGAGCAGGTGGCCGATCTTGCGGGCATTTCGCGCCCGCGCTACCGCGACATCGAGACGGGGGCGGCGGCTGCGCGCACCACGACATTGATCAACATTGCCAGGGCGCTTGGGCTGGAAATGATGCTGGTCCCGCAGGCGATGGTGCCCGCCATCGAGGCGCTTCTGCGCCCCGAGGCCGAGGATGATCATCCGGCCTTCAGCCCGCAACCGGAGAGCGACGATGACAGCCGTCCGTACCGCTGA
PROTEIN sequence
Length: 107
MKAEEETLRLIGDHFRRARLAAGLTQEQVADLAGISRPRYRDIETGAAAARTTTLINIARALGLEMMLVPQAMVPAIEALLRPEAEDDHPAFSPQPESDDDSRPYR*